Difference between revisions of "Tiso gene 13463"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.25-RXN 6.3.2.25-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** tubulin-tyrosine_liga...")
(Created page with "Category:Gene == Gene Tiso_gene_13463 == * right end position: ** 4689 * transcription direction: ** POSITIVE * left end position: ** 2389 * centisome position: ** 38.0777...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.25-RXN 6.3.2.25-RXN] ==
+
== Gene Tiso_gene_13463 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 4689
−
* common name:
+
* transcription direction:
−
** tubulin-tyrosine_ligase
+
** POSITIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/6.3.2.25 EC-6.3.2.25]
+
** 2389
 +
* centisome position:
 +
** 38.07778   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[2.7.1.148-RXN]]
−
** 1 [[Detyrosinated-alpha--tubulins]][c] '''+''' 1 [[TYR]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Alpha-tubulins]][c] '''+''' 1 [[Pi]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 detyrosinated α-tubulin[c] '''+''' 1 L-tyrosine[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 α-tubulin[c] '''+''' 1 phosphate[c]
+
** Source: [[annotation-experimental_annotation]]
−
 
+
*** Assignment: ec-number
−
== Genes associated with this reaction  ==
+
** Source: [[orthology-athaliana]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** Source: [[orthology-synechocystis]]
−
* [[Tiso_gene_17589]]
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-creinhardtii]]
−
* [[Tiso_gene_5828]]
+
== Pathways associated ==
−
** [[pantograph]]-[[esiliculosus]]
+
* [[NONMEVIPP-PWY]]
−
* [[Tiso_gene_17450]]
+
* [[PWY-7560]]
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_14575]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_3379]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_10591]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_15094]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_10440]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_15093]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_17234]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_20330]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_9268]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_4516]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
== Pathways ==
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: right end position=4689}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R04730 R04730]
+
{{#set: transcription direction=POSITIVE}}
−
* UNIPROT:
+
{{#set: left end position=2389}}
−
** [http://www.uniprot.org/uniprot/P38160 P38160]
+
{{#set: centisome position=38.07778    }}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction associated=2.7.1.148-RXN}}
−
{{#set: common name=tubulin-tyrosine_ligase}}
+
{{#set: pathway associated=NONMEVIPP-PWY|PWY-7560}}
−
{{#set: ec number=EC-6.3.2.25}}
+
−
{{#set: gene associated=Tiso_gene_17589|Tiso_gene_5828|Tiso_gene_17450|Tiso_gene_14575|Tiso_gene_3379|Tiso_gene_10591|Tiso_gene_15094|Tiso_gene_10440|Tiso_gene_15093|Tiso_gene_17234|Tiso_gene_20330|Tiso_gene_9268|Tiso_gene_4516}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 21:17, 21 March 2018

Gene Tiso_gene_13463

  • right end position:
    • 4689
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2389
  • centisome position:
    • 38.07778
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13463&oldid=47503"