Difference between revisions of "Tiso gene 13809"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15881 RXN-15881] == * direction: ** LEFT-TO-RIGHT * common name: ** cysteine_desulfurase_for_ir...")
(Created page with "Category:Gene == Gene Tiso_gene_13809 == * right end position: ** 5206 * transcription direction: ** NEGATIVE * left end position: ** 218 * centisome position: ** 3.605689...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15881 RXN-15881] ==
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== Gene Tiso_gene_13809 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 5206
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* common name:
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* transcription direction:
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** cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf
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** NEGATIVE
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** cysteine_mitochondrial
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* left end position:
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* ec number:
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** 218
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** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7]
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* centisome position:
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** 3.6056898   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ASPARTATEKIN-RXN]]
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** 1 [[CYS]][c] '''+''' 1 [[L-Cysteine-Desulfurases]][c] '''=>''' 1 [[Persulfurated-L-cysteine-desulfurases]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c]
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* With common name(s):
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** 1 L-cysteine[c] '''+''' 1 an [L-cysteine desulfurase][c] '''=>''' 1 an S-sulfanyl-[L-cysteine desulfurase][c] '''+''' 1 L-alanine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_11478]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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** Source: [[orthology-athaliana]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-synechocystis]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_14710]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[annotation-experimental_annotation]]
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== Pathways associated ==
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*** Assignment: EC-NUMBER
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* [[HOMOSERSYN-PWY]]
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** Source: [[orthology-esiliculosus]]
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* [[PWY-7153]]
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* Gene: [[Tiso_gene_4284]]
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* [[DAPLYSINESYN-PWY]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-2942]]
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*** Assignment: EC-NUMBER
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* [[PWY-2941]]
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** Source: [[annotation-experimental_annotation]]
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* [[PWY-6559]]
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*** Assignment: EC-NUMBER
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* [[PWY-5097]]
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** Source: [[orthology-esiliculosus]]
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* [[PWY-6562]]
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== Pathways ==
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* [[P101-PWY]]
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* [[PWY-7250]], [2Fe-2S] iron-sulfur cluster biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7250 PWY-7250]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=5206}}
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{{#set: common name=cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=cysteine_mitochondrial}}
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{{#set: left end position=218}}
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{{#set: ec number=EC-2.8.1.7}}
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{{#set: centisome position=3.6056898    }}
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{{#set: gene associated=Tiso_gene_11478|Tiso_gene_14710|Tiso_gene_4284}}
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{{#set: reaction associated=ASPARTATEKIN-RXN}}
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{{#set: in pathway=PWY-7250}}
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{{#set: pathway associated=HOMOSERSYN-PWY|PWY-7153|DAPLYSINESYN-PWY|PWY-2942|PWY-2941|PWY-6559|PWY-5097|PWY-6562|P101-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 21:17, 21 March 2018

Gene Tiso_gene_13809

  • right end position:
    • 5206
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 218
  • centisome position:
    • 3.6056898
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13809&oldid=47475"