Difference between revisions of "Tiso gene 13929"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MERCAPYSTRANS-RXN MERCAPYSTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-mercaptop...")
(Created page with "Category:Gene == Gene Tiso_gene_13929 == * right end position: ** 5661 * transcription direction: ** POSITIVE * left end position: ** 3403 * centisome position: ** 57.1068...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MERCAPYSTRANS-RXN MERCAPYSTRANS-RXN] ==
+
== Gene Tiso_gene_13929 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 5661
−
* common name:
+
* transcription direction:
−
** 3-mercaptopyruvate_sulfurtransferase
+
** POSITIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/2.8.1.2 EC-2.8.1.2]
+
** 3403
 +
* centisome position:
 +
** 57.106895   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[5-NUCLEOTID-RXN]]
−
** 1 [[3-MERCAPTO-PYRUVATE]][c] '''+''' 1 [[HCN]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[HSCN]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 3-mercaptopyruvate[c] '''+''' 1 hydrogen cyanide[c] '''=>''' 1 H+[c] '''+''' 1 pyruvate[c] '''+''' 1 thiocyanate[c]
+
** Source: [[orthology-esiliculosus]]
−
 
+
* Reaction: [[AMP-DEPHOSPHORYLATION-RXN]]
−
== Genes associated with this reaction  ==
+
** Source: [[annotation-in-silico_annotation]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** Assignment: ec-number
−
* Gene: [[Tiso_gene_5838]]
+
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-14025]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-14026]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-14227]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-5841]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-7607]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-7609]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
*** Assignment: ec-number
−
** Source: [[annotation-experimental_annotation]]
+
** Source: [[orthology-esiliculosus]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
* Reaction: [[XMPXAN-RXN]]
−
== Pathways  ==
+
−
* [[PWY-5329]], L-cysteine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5329 PWY-5329]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways associated ==
 +
* [[PWY-5381]]
 +
* [[PWY-6607]]
 +
* [[PWY-7185]]
 +
* [[PWY-7821]]
 +
* [[SALVADEHYPOX-PWY]]
 +
* [[PWY-6596]]
 +
* [[NAD-BIOSYNTHESIS-II]]
 +
* [[PWY-6606]]
 +
* [[PWY-6608]]
 +
* [[PWY-5695]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=5661}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21740 21740]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=3403}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03106 R03106]
+
{{#set: centisome position=57.106895    }}
−
* UNIPROT:
+
{{#set: reaction associated=5-NUCLEOTID-RXN|AMP-DEPHOSPHORYLATION-RXN|RXN-14025|RXN-14026|RXN-14227|RXN-5841|RXN-7607|RXN-7609|XMPXAN-RXN}}
−
** [http://www.uniprot.org/uniprot/Q9USJ1 Q9USJ1]
+
{{#set: pathway associated=PWY-5381|PWY-6607|PWY-7185|PWY-7821|SALVADEHYPOX-PWY|PWY-6596|NAD-BIOSYNTHESIS-II|PWY-6606|PWY-6608|PWY-5695}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=3-mercaptopyruvate_sulfurtransferase}}
+
−
{{#set: ec number=EC-2.8.1.2}}
+
−
{{#set: gene associated=Tiso_gene_5838}}
+
−
{{#set: in pathway=PWY-5329}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 21:23, 21 March 2018

Gene Tiso_gene_13929

  • right end position:
    • 5661
  • transcription direction:
    • POSITIVE
  • left end position:
    • 3403
  • centisome position:
    • 57.106895
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13929&oldid=48386"