Difference between revisions of "Tiso gene 14060"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11856 RXN-11856] == * direction: ** LEFT-TO-RIGHT * common name: ** tRNA (cytosine(34)-C(5))-me...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7119 PWY-7119] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11856 RXN-11856] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7119 PWY-7119] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 
* common name:
 
* common name:
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** tRNA (cytosine(34)-C(5))-methyltransferase
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** sphingolipid recycling and degradation (yeast)
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* ec number:
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** [http://enzyme.expasy.org/EC/2.1.1.203 EC-2.1.1.203]
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** [http://enzyme.expasy.org/EC/2.1.1.202 EC-2.1.1.202]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''11''' reactions in the full pathway
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Cytosine-34-tRNA-Precursors]][c] '''=>''' 1 [[5-METHYLCYTOSINE-34-TRNA-PRECURSORS]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
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* [[CERAMIDASE-YEAST-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 a cytosine34 in tRNA precursor[c] '''=>''' 1 a 5 methylcytosine34 in tRNA precursor[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c]
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*** [[Tiso_gene_14341]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-13729]]
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* [[Tiso_gene_3065]]
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** 1 associated gene(s):
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** EXPERIMENTAL_ANNOTATION
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*** [[Tiso_gene_105]]
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***EC-NUMBER
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** 2 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-in-silico_annotation]]
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* [[PWY-6829]], tRNA methylation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6829 PWY-6829]
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*** [[orthology-esiliculosus]]
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** '''3''' reactions found over '''15''' reactions in the full pathway
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* [[RXN-13733]]
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== Reconstruction information  ==
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** 2 associated gene(s):
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* [[annotation]]:
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*** [[Tiso_gene_14341]]
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** [[pathwaytools]]:
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*** [[Tiso_gene_4555]]
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*** [[experimental_annotation]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_105]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[SPHINGANINE-KINASE-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_1163]]
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*** [[Tiso_gene_14560]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=DHS-PHOSPHATASE-RXN DHS-PHOSPHATASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13730 RXN-13730]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13731 RXN-13731]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13732 RXN-13732]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-458 RXN3O-458]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-504 RXN3O-504]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-4751}}
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{{#set: common name=tRNA (cytosine(34)-C(5))-methyltransferase}}
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{{#set: common name=sphingolipid recycling and degradation (yeast)}}
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{{#set: ec number=EC-2.1.1.203}}
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{{#set: reaction found=5}}
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{{#set: ec number=EC-2.1.1.202}}
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{{#set: total reaction=11}}
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{{#set: gene associated=Tiso_gene_3065}}
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{{#set: completion rate=45.0}}
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{{#set: in pathway=PWY-6829}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation}}
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Revision as of 19:24, 18 March 2018

Pathway PWY-7119

  • taxonomic range:
  • common name:
    • sphingolipid recycling and degradation (yeast)
  • Synonym(s):

Reaction(s) found

5 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14060&oldid=24076"