Difference between revisions of "Tiso gene 14060"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7119 PWY-7119] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-12...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7119 PWY-7119] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
 
* common name:
 
* common name:
−
** sphingolipid recycling and degradation (yeast)
+
** heterolactic fermentation
 
* Synonym(s):
 
* Synonym(s):
 +
** lactate heterofermentation
 +
** glucose fermentation to lactate
 +
** phosphoketolase pathway
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''5''' reactions found over '''11''' reactions in the full pathway
+
  '''14''' reactions found over '''18''' reactions in the full pathway
−
* [[CERAMIDASE-YEAST-RXN]]
+
* [[2PGADEHYDRAT-RXN]]
−
** 1 associated gene(s):
+
** 4 associated gene(s):
−
*** [[Tiso_gene_14341]]
+
*** [[Tiso_gene_8720]]
−
** 1 reconstruction source(s) associated:
+
*** [[Tiso_gene_14718]]
 +
*** [[Tiso_gene_5619]]
 +
*** [[Tiso_gene_13317]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
−
* [[RXN-13729]]
 
−
** 1 associated gene(s):
 
−
*** [[Tiso_gene_105]]
 
−
** 2 reconstruction source(s) associated:
 
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[6PGLUCONDEHYDROG-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_91]]
 +
*** [[Tiso_gene_20238]]
 +
*** [[Tiso_gene_7157]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-creinhardtii]]
 +
*** [[orthology-synechocystis]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
−
* [[RXN-13733]]
+
* [[6PGLUCONOLACT-RXN]]
 +
** 5 associated gene(s):
 +
*** [[Tiso_gene_10799]]
 +
*** [[Tiso_gene_20412]]
 +
*** [[Tiso_gene_5901]]
 +
*** [[Tiso_gene_15950]]
 +
*** [[Tiso_gene_8585]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[ACETALD-DEHYDROG-RXN]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
−
*** [[Tiso_gene_14341]]
+
*** [[Tiso_gene_7649]]
−
*** [[Tiso_gene_4555]]
+
*** [[Tiso_gene_2052]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-creinhardtii]]
 +
* [[ALCOHOL-DEHYDROG-RXN]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_18459]]
 +
*** [[Tiso_gene_7649]]
 +
*** [[Tiso_gene_6563]]
 +
*** [[Tiso_gene_5424]]
 +
*** [[Tiso_gene_5425]]
 +
*** [[Tiso_gene_6562]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
* [[FRUCTOKINASE-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_1303]]
 +
*** [[Tiso_gene_17974]]
 +
*** [[Tiso_gene_3107]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-creinhardtii]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[GAPOXNPHOSPHN-RXN]]
 +
** 5 associated gene(s):
 +
*** [[Tiso_gene_20000]]
 +
*** [[Tiso_gene_235]]
 +
*** [[Tiso_gene_10646]]
 +
*** [[Tiso_gene_3344]]
 +
*** [[Tiso_gene_6766]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
−
* [[SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN]]
+
*** [[annotation-in-silico_annotation]]
−
** 1 associated gene(s):
+
−
*** [[Tiso_gene_105]]
+
−
** 3 reconstruction source(s) associated:
+
 
*** [[orthology-athaliana]]
 
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[GLU6PDEHYDROG-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_16918]]
 +
*** [[Tiso_gene_14877]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
−
* [[SPHINGANINE-KINASE-RXN]]
+
* [[GLUCOKIN-RXN]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
−
*** [[Tiso_gene_1163]]
+
*** [[Tiso_gene_3107]]
−
*** [[Tiso_gene_14560]]
+
*** [[Tiso_gene_1303]]
−
** 1 reconstruction source(s) associated:
+
** 4 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
* [[PEPDEPHOS-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_18206]]
 +
*** [[Tiso_gene_14504]]
 +
*** [[Tiso_gene_974]]
 +
*** [[Tiso_gene_14505]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 
*** [[orthology-creinhardtii]]
 
*** [[orthology-creinhardtii]]
 +
* [[PGLUCISOM-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_19480]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[PHOSGLYPHOS-RXN]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_3526]]
 +
*** [[Tiso_gene_18264]]
 +
*** [[Tiso_gene_3527]]
 +
*** [[Tiso_gene_18263]]
 +
*** [[Tiso_gene_12104]]
 +
*** [[Tiso_gene_14642]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[RIBULP3EPIM-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_19140]]
 +
*** [[Tiso_gene_4754]]
 +
*** [[Tiso_gene_10879]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[RXN-15513]]
 +
** 8 associated gene(s):
 +
*** [[Tiso_gene_7201]]
 +
*** [[Tiso_gene_14530]]
 +
*** [[Tiso_gene_16271]]
 +
*** [[Tiso_gene_9922]]
 +
*** [[Tiso_gene_2841]]
 +
*** [[Tiso_gene_2365]]
 +
*** [[Tiso_gene_14664]]
 +
*** [[Tiso_gene_9923]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=DHS-PHOSPHATASE-RXN DHS-PHOSPHATASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=DLACTDEHYDROGNAD-RXN DLACTDEHYDROGNAD-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13730 RXN-13730]
+
* [http://metacyc.org/META/NEW-IMAGE?object=L-LACTATE-DEHYDROGENASE-RXN L-LACTATE-DEHYDROGENASE-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13731 RXN-13731]
+
* [http://metacyc.org/META/NEW-IMAGE?object=PHOSACETYLTRANS-RXN PHOSACETYLTRANS-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13732 RXN-13732]
+
* [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOKETOLASE-RXN PHOSPHOKETOLASE-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-458 RXN3O-458]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-504 RXN3O-504]
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-4751}}
+
{{#set: taxonomic range=TAX-1239}}
−
{{#set: common name=sphingolipid recycling and degradation (yeast)}}
+
{{#set: common name=heterolactic fermentation}}
−
{{#set: reaction found=5}}
+
{{#set: common name=lactate heterofermentation|glucose fermentation to lactate|phosphoketolase pathway}}
−
{{#set: total reaction=11}}
+
{{#set: reaction found=14}}
−
{{#set: completion rate=45.0}}
+
{{#set: total reaction=18}}
 +
{{#set: completion rate=78.0}}

Revision as of 16:20, 21 March 2018

Pathway P122-PWY

  • taxonomic range:
  • common name:
    • heterolactic fermentation
  • Synonym(s):
    • lactate heterofermentation
    • glucose fermentation to lactate
    • phosphoketolase pathway

Reaction(s) found

14 reactions found over 18 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14060&oldid=33613"