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| Line 1: |
Line 1: |
| − | [[Category:Pathway]] | + | [[Category:Gene]] |
| − | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY] == | + | == Gene Tiso_gene_14060 == |
| − | * taxonomic range: | + | * right end position: |
| − | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239] | + | ** 4533 |
| − | * common name: | + | * transcription direction: |
| − | ** heterolactic fermentation | + | ** NEGATIVE |
| | + | * left end position: |
| | + | ** 1681 |
| | + | * centisome position: |
| | + | ** 28.627384 |
| | * Synonym(s): | | * Synonym(s): |
| − | ** lactate heterofermentation
| |
| − | ** glucose fermentation to lactate
| |
| − | ** phosphoketolase pathway
| |
| | | | |
| − | == Reaction(s) found == | + | == Reactions associated == |
| − | '''14''' reactions found over '''18''' reactions in the full pathway
| + | * Reaction: [[MYRISTOYLACYLTRAN-RXN]] |
| − | * [[2PGADEHYDRAT-RXN]] | + | ** Source: [[annotation-in-silico_annotation]] |
| − | ** 4 associated gene(s):
| + | *** Assignment: automated-name-match |
| − | *** [[Tiso_gene_8720]]
| + | == Pathways associated == |
| − | *** [[Tiso_gene_14718]]
| + | * [[KDO-NAGLIPASYN-PWY]] |
| − | *** [[Tiso_gene_5619]]
| + | * [[KDO-LIPASYN-PWY]] |
| − | *** [[Tiso_gene_13317]]
| + | |
| − | ** 7 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | * [[6PGLUCONDEHYDROG-RXN]]
| + | |
| − | ** 3 associated gene(s): | + | |
| − | *** [[Tiso_gene_91]]
| + | |
| − | *** [[Tiso_gene_20238]]
| + | |
| − | *** [[Tiso_gene_7157]]
| + | |
| − | ** 4 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[6PGLUCONOLACT-RXN]]
| + | |
| − | ** 5 associated gene(s):
| + | |
| − | *** [[Tiso_gene_10799]]
| + | |
| − | *** [[Tiso_gene_20412]]
| + | |
| − | *** [[Tiso_gene_5901]]
| + | |
| − | *** [[Tiso_gene_15950]]
| + | |
| − | *** [[Tiso_gene_8585]]
| + | |
| − | ** 6 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]] | + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | * [[ACETALD-DEHYDROG-RXN]]
| + | |
| − | ** 2 associated gene(s):
| + | |
| − | *** [[Tiso_gene_7649]]
| + | |
| − | *** [[Tiso_gene_2052]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | * [[ALCOHOL-DEHYDROG-RXN]]
| + | |
| − | ** 6 associated gene(s):
| + | |
| − | *** [[Tiso_gene_18459]]
| + | |
| − | *** [[Tiso_gene_7649]]
| + | |
| − | *** [[Tiso_gene_6563]]
| + | |
| − | *** [[Tiso_gene_5424]]
| + | |
| − | *** [[Tiso_gene_5425]]
| + | |
| − | *** [[Tiso_gene_6562]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | * [[FRUCTOKINASE-RXN]]
| + | |
| − | ** 3 associated gene(s):
| + | |
| − | *** [[Tiso_gene_1303]]
| + | |
| − | *** [[Tiso_gene_17974]]
| + | |
| − | *** [[Tiso_gene_3107]]
| + | |
| − | ** 4 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | * [[GAPOXNPHOSPHN-RXN]]
| + | |
| − | ** 5 associated gene(s):
| + | |
| − | *** [[Tiso_gene_20000]]
| + | |
| − | *** [[Tiso_gene_235]]
| + | |
| − | *** [[Tiso_gene_10646]]
| + | |
| − | *** [[Tiso_gene_3344]]
| + | |
| − | *** [[Tiso_gene_6766]]
| + | |
| − | ** 7 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | * [[GLU6PDEHYDROG-RXN]]
| + | |
| − | ** 2 associated gene(s):
| + | |
| − | *** [[Tiso_gene_16918]]
| + | |
| − | *** [[Tiso_gene_14877]]
| + | |
| − | ** 4 reconstruction source(s) associated:
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[GLUCOKIN-RXN]]
| + | |
| − | ** 2 associated gene(s):
| + | |
| − | *** [[Tiso_gene_3107]]
| + | |
| − | *** [[Tiso_gene_1303]]
| + | |
| − | ** 4 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[PEPDEPHOS-RXN]]
| + | |
| − | ** 4 associated gene(s):
| + | |
| − | *** [[Tiso_gene_18206]]
| + | |
| − | *** [[Tiso_gene_14504]]
| + | |
| − | *** [[Tiso_gene_974]]
| + | |
| − | *** [[Tiso_gene_14505]]
| + | |
| − | ** 7 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | * [[PGLUCISOM-RXN]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[Tiso_gene_19480]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[PHOSGLYPHOS-RXN]]
| + | |
| − | ** 6 associated gene(s):
| + | |
| − | *** [[Tiso_gene_3526]]
| + | |
| − | *** [[Tiso_gene_18264]]
| + | |
| − | *** [[Tiso_gene_3527]]
| + | |
| − | *** [[Tiso_gene_18263]]
| + | |
| − | *** [[Tiso_gene_12104]]
| + | |
| − | *** [[Tiso_gene_14642]]
| + | |
| − | ** 7 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | * [[RIBULP3EPIM-RXN]]
| + | |
| − | ** 3 associated gene(s):
| + | |
| − | *** [[Tiso_gene_19140]]
| + | |
| − | *** [[Tiso_gene_4754]]
| + | |
| − | *** [[Tiso_gene_10879]]
| + | |
| − | ** 7 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | * [[RXN-15513]]
| + | |
| − | ** 8 associated gene(s):
| + | |
| − | *** [[Tiso_gene_7201]]
| + | |
| − | *** [[Tiso_gene_14530]]
| + | |
| − | *** [[Tiso_gene_16271]]
| + | |
| − | *** [[Tiso_gene_9922]]
| + | |
| − | *** [[Tiso_gene_2841]]
| + | |
| − | *** [[Tiso_gene_2365]]
| + | |
| − | *** [[Tiso_gene_14664]]
| + | |
| − | *** [[Tiso_gene_9923]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | == Reaction(s) not found == | + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=DLACTDEHYDROGNAD-RXN DLACTDEHYDROGNAD-RXN] | + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=L-LACTATE-DEHYDROGENASE-RXN L-LACTATE-DEHYDROGENASE-RXN]
| + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=PHOSACETYLTRANS-RXN PHOSACETYLTRANS-RXN] | + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOKETOLASE-RXN PHOSPHOKETOLASE-RXN]
| + | |
| | == External links == | | == External links == |
| − | {{#set: taxonomic range=TAX-1239}} | + | {{#set: right end position=4533}} |
| − | {{#set: common name=heterolactic fermentation}} | + | {{#set: transcription direction=NEGATIVE}} |
| − | {{#set: common name=lactate heterofermentation|glucose fermentation to lactate|phosphoketolase pathway}} | + | {{#set: left end position=1681}} |
| − | {{#set: reaction found=14}} | + | {{#set: centisome position=28.627384 }} |
| − | {{#set: total reaction=18}} | + | {{#set: reaction associated=MYRISTOYLACYLTRAN-RXN}} |
| − | {{#set: completion rate=78.0}} | + | {{#set: pathway associated=KDO-NAGLIPASYN-PWY|KDO-LIPASYN-PWY}} |
