Difference between revisions of "Tiso gene 14085"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSOPHOSPHOLIPASE-RXN LYSOPHOSPHOLIPASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** lys...")
 
(Created page with "Category:Gene == Gene Tiso_gene_10378 == * left end position: ** 3723 * transcription direction: ** POSITIVE * right end position: ** 5319 * centisome position: ** 43.2705...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSOPHOSPHOLIPASE-RXN LYSOPHOSPHOLIPASE-RXN] ==
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== Gene Tiso_gene_10378 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3723
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* common name:
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* transcription direction:
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** lysophospholipase
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** POSITIVE
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** ORF
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* right end position:
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* ec number:
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** 5319
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** [http://enzyme.expasy.org/EC/3.1.1.5 EC-3.1.1.5]
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* centisome position:
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** 43.270573   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[TYROSINE--TRNA-LIGASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[2-Lysophosphatidylcholines]][c] '''=>''' 1 [[L-1-GLYCERO-PHOSPHORYLCHOLINE]][c] '''+''' 1 [[Carboxylates]][c] '''+''' 1 [[PROTON]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 H2O[c] '''+''' 1 a 1-acyl-sn-glycero-3-phosphocholine[c] '''=>''' 1 sn-glycero-3-phosphocholine[c] '''+''' 1 a carboxylate[c] '''+''' 1 H+[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_12479]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_19778]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_12478]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15692]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_8353]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_334]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12375]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_20565]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2505]]
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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== Pathways associated ==
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== Reconstruction information  ==
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* [[TRNA-CHARGING-PWY]]
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3723}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15177 15177]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5319}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02746 R02746]
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{{#set: centisome position=43.270573    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R07291 R07291]
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{{#set: reaction associated=TYROSINE--TRNA-LIGASE-RXN}}
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* UNIPROT:
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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** [http://www.uniprot.org/uniprot/O07427 O07427]
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** [http://www.uniprot.org/uniprot/Q7M3V3 Q7M3V3]
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** [http://www.uniprot.org/uniprot/P07000 P07000]
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** [http://www.uniprot.org/uniprot/P0ADA1 P0ADA1]
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** [http://www.uniprot.org/uniprot/P39457 P39457]
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** [http://www.uniprot.org/uniprot/Q03674 Q03674]
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** [http://www.uniprot.org/uniprot/P53541 P53541]
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** [http://www.uniprot.org/uniprot/P78854 P78854]
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** [http://www.uniprot.org/uniprot/O42970 O42970]
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** [http://www.uniprot.org/uniprot/Q9P327 Q9P327]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=lysophospholipase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-3.1.1.5}}
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{{#set: gene associated=Tiso_gene_12479|Tiso_gene_19778|Tiso_gene_12478|Tiso_gene_15692|Tiso_gene_8353|Tiso_gene_334|Tiso_gene_12375|Tiso_gene_20565|Tiso_gene_2505}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 17:52, 10 January 2018

Gene Tiso_gene_10378

  • left end position:
    • 3723
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5319
  • centisome position:
    • 43.270573
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14085&oldid=15052"