Difference between revisions of "Tiso gene 16097"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TREHALA-RXN TREHALA-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** glycoside_hydrol...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12932 CPD-12932] == * smiles: ** CC(C)=CC=CC(C)=CC=CC(C)=CC=CC(C)=CC=CC=C(C)C=CC=C(C)C=CC=C...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TREHALA-RXN TREHALA-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12932 CPD-12932] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(C)=CC=CC(C)=CC=CC(C)=CC=CC(C)=CC=CC=C(C)C=CC=C(C)C=CC=C(C)CCC=C(C)C
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* inchi key:
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** InChIKey=OCMSUPSDVXKDFY-FQMRBFJQSA-N
 
* common name:
 
* common name:
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** ORF
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** all-trans-3,4-didehydrolycopene
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** glycoside_hydrolase_family_37
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* molecular weight:
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* ec number:
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** 534.867   
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** [http://enzyme.expasy.org/EC/3.2.1.28 EC-3.2.1.28]
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* Synonym(s):
 
* Synonym(s):
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** 3,4-dehydrolycopene
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** 3,4-didehydrolycopene
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-11999]]
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** 1 [[TREHALOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLC]][c] '''+''' 1 [[ALPHA-GLUCOSE]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 α,α-trehalose[c] '''+''' 1 H2O[c] '''=>''' 1 β-D-glucopyranose[c] '''+''' 1 α-D-glucopyranose[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_13748]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7688]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY0-1182]], trehalose degradation II (trehalase): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1182 PWY0-1182]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY0-1466]], trehalose degradation VI (periplasmic): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1466 PWY0-1466]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R00010 R00010]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=16061227 16061227]
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* UNIPROT:
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P19813 P19813]
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** [http://www.chemspider.com/Chemical-Structure.17220904.html 17220904]
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** [http://www.uniprot.org/uniprot/O43280 O43280]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P13482 P13482]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=62474 62474]
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** [http://www.uniprot.org/uniprot/P32359 P32359]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P32358 P32358]
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** [http://www.genome.jp/dbget-bin/www_bget?C15867 C15867]
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** [http://www.uniprot.org/uniprot/P35172 P35172]
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{{#set: smiles=CC(C)=CC=CC(C)=CC=CC(C)=CC=CC(C)=CC=CC=C(C)C=CC=C(C)C=CC=C(C)CCC=C(C)C}}
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** [http://www.uniprot.org/uniprot/P62601 P62601]
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{{#set: inchi key=InChIKey=OCMSUPSDVXKDFY-FQMRBFJQSA-N}}
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** [http://www.uniprot.org/uniprot/P32356 P32356]
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{{#set: common name=all-trans-3,4-didehydrolycopene}}
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** [http://www.uniprot.org/uniprot/P48016 P48016]
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{{#set: molecular weight=534.867    }}
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** [http://www.uniprot.org/uniprot/P78922 P78922]
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{{#set: common name=3,4-dehydrolycopene|3,4-didehydrolycopene}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: consumed by=RXN-11999}}
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{{#set: common name=ORF}}
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{{#set: common name=glycoside_hydrolase_family_37}}
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{{#set: ec number=EC-3.2.1.28}}
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{{#set: gene associated=Tiso_gene_13748|Tiso_gene_7688}}
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{{#set: in pathway=PWY0-1182|PWY0-1466}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:21, 10 January 2018

Metabolite CPD-12932

  • smiles:
    • CC(C)=CC=CC(C)=CC=CC(C)=CC=CC(C)=CC=CC=C(C)C=CC=C(C)C=CC=C(C)CCC=C(C)C
  • inchi key:
    • InChIKey=OCMSUPSDVXKDFY-FQMRBFJQSA-N
  • common name:
    • all-trans-3,4-didehydrolycopene
  • molecular weight:
    • 534.867
  • Synonym(s):
    • 3,4-dehydrolycopene
    • 3,4-didehydrolycopene

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links




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