Difference between revisions of "Tiso gene 16154"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPGLCNACEPIM-RXN UDPGLCNACEPIM-RXN] == * direction: ** REVERSIBLE * common name: ** glycosyltransf...")
(Created page with "Category:Gene == Gene Tiso_gene_16154 == * right end position: ** 3420 * transcription direction: ** POSITIVE * left end position: ** 3231 * centisome position: ** 71.0265...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPGLCNACEPIM-RXN UDPGLCNACEPIM-RXN] ==
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== Gene Tiso_gene_16154 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 3420
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* common name:
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* transcription direction:
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** glycosyltransferase_family_protein_2
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/5.1.3.14 EC-5.1.3.14]
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** 3231
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* centisome position:
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** 71.026596   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GLYOHMETRANS-RXN]]
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** 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''<=>''' 1 [[UDP-MANNAC]][c]
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* With common name(s):
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** 1 UDP-N-acetyl-&alpha;-D-glucosamine[c] '''<=>''' 1 UDP-N-acetyl-&alpha;-D-mannosamine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_1316]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-7816]], poly(ribitol phosphate) wall teichoic acid biosynthesis II (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7816 PWY-7816]
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** '''1''' reactions found over '''17''' reactions in the full pathway
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* [[PWY-7815]], poly(ribitol phosphate) wall teichoic acid biosynthesis I (B. subtilis): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7815 PWY-7815]
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** '''1''' reactions found over '''15''' reactions in the full pathway
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* [[TEICHOICACID-PWY]], poly(glycerol phosphate) wall teichoic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TEICHOICACID-PWY TEICHOICACID-PWY]
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** '''1''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-7819]], poly(3-O-&beta;-D-glucopyranosyl-N-acetylgalactosamine 1-phosphate) wall teichoic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7819 PWY-7819]
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** '''1''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-7335]], UDP-N-acetyl-&alpha;-D-mannosaminouronate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7335 PWY-7335]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-2161]]
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* [[PWY-1622]]
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* [[PWY-3841]]
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* [[1CMET2-PWY]]
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* [[PWY-3661]]
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* [[GLYSYN-PWY]]
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* [[PWY-5497]]
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* [[PWY-2201]]
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* [[PWY-181]]
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* [[PWY-3661-1]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=3420}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17213 17213]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=3231}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00420 R00420]
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{{#set: centisome position=71.026596    }}
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* UNIPROT:
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{{#set: reaction associated=GLYOHMETRANS-RXN}}
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** [http://www.uniprot.org/uniprot/Q9JWW9 Q9JWW9]
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{{#set: pathway associated=PWY-2161|PWY-1622|PWY-3841|1CMET2-PWY|PWY-3661|GLYSYN-PWY|PWY-5497|PWY-2201|PWY-181|PWY-3661-1}}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=glycosyltransferase_family_protein_2}}
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{{#set: ec number=EC-5.1.3.14}}
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{{#set: gene associated=Tiso_gene_1316}}
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{{#set: in pathway=PWY-7816|PWY-7815|TEICHOICACID-PWY|PWY-7819|PWY-7335}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 21:24, 21 March 2018

Gene Tiso_gene_16154

  • right end position:
    • 3420
  • transcription direction:
    • POSITIVE
  • left end position:
    • 3231
  • centisome position:
    • 71.026596
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_16154&oldid=48517"