Difference between revisions of "Tiso gene 17170"

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(Created page with "Category:Gene == Gene Tiso_gene_4244 == * left end position: ** 12634 * transcription direction: ** POSITIVE * right end position: ** 14835 * centisome position: ** 83.431...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALIC-NADP-RXN MALIC-NADP-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expa...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_4244 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALIC-NADP-RXN MALIC-NADP-RXN] ==
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* left end position:
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* direction:
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** 12634
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/1.1.1.40 EC-1.1.1.40]
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* right end position:
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** 14835
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* centisome position:
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** 83.43128   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[5.3.4.1-RXN]]
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* With identifiers:
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** 1 [[NADP]][c] '''+''' 1 [[MAL]][c] '''=>''' 1 [[NADPH]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* With common name(s):
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** 1 NADP+[c] '''+''' 1 (S)-malate[c] '''=>''' 1 NADPH[c] '''+''' 1 pyruvate[c] '''+''' 1 CO2[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_6675]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_12896]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[DISULFOXRED-RXN]]
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* [[Tiso_gene_12200]]
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** in-silico_annotation
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** [[pantograph]]-[[athaliana]]
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***automated-name-match
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** [[pantograph]]-[[synechocystis]]
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* [[DISULISOM-RXN]]
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways associated ==
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== Pathways ==
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* [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-241 PWY-241]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
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** '''13''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
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** '''7''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=12634}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18253 18253]
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{{#set: right end position=14835}}
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* LIGAND-RXN:
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{{#set: centisome position=83.43128    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00216 R00216]
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{{#set: reaction associated=5.3.4.1-RXN|DISULFOXRED-RXN|DISULISOM-RXN}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P12628 P12628]
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** [http://www.uniprot.org/uniprot/P06801 P06801]
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** [http://www.uniprot.org/uniprot/P13697 P13697]
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** [http://www.uniprot.org/uniprot/P16243 P16243]
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** [http://www.uniprot.org/uniprot/O48656 O48656]
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** [http://www.uniprot.org/uniprot/P22178 P22178]
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** [http://www.uniprot.org/uniprot/P93139 P93139]
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** [http://www.uniprot.org/uniprot/P34105 P34105]
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** [http://www.uniprot.org/uniprot/P28227 P28227]
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** [http://www.uniprot.org/uniprot/P36444 P36444]
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** [http://www.uniprot.org/uniprot/P40927 P40927]
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** [http://www.uniprot.org/uniprot/P37223 P37223]
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** [http://www.uniprot.org/uniprot/P48163 P48163]
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** [http://www.uniprot.org/uniprot/Q16798 Q16798]
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** [http://www.uniprot.org/uniprot/O50015 O50015]
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** [http://www.uniprot.org/uniprot/O04935 O04935]
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** [http://www.uniprot.org/uniprot/O04936 O04936]
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** [http://www.uniprot.org/uniprot/P37222 P37222]
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** [http://www.uniprot.org/uniprot/Q42888 Q42888]
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** [http://www.uniprot.org/uniprot/Q42889 Q42889]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.1.1.40}}
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{{#set: gene associated=Tiso_gene_6675|Tiso_gene_12896|Tiso_gene_12200}}
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{{#set: in pathway=PWY-241|GLUCONEO-PWY|PWY-7117}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-synechocystis|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 01:08, 19 March 2018

Reaction MALIC-NADP-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADP+[c] + 1 (S)-malate[c] => 1 NADPH[c] + 1 pyruvate[c] + 1 CO2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-241, C4 photosynthetic carbon assimilation cycle, NADP-ME type: PWY-241
    • 2 reactions found over 5 reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
    • 13 reactions found over 13 reactions in the full pathway
  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type: PWY-7117
    • 7 reactions found over 10 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17170&oldid=28883"