Difference between revisions of "Tiso gene 17237"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTSEMIALDEHYDROG-RXN GLUTSEMIALDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** g...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14426 CPD-14426] == * smiles: ** CCC=CCC=CCC=CCC=CCC=CCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTSEMIALDEHYDROG-RXN GLUTSEMIALDEHYDROG-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14426 CPD-14426] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CCC=CCC=CCC=CCC=CCC=CCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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* inchi key:
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** InChIKey=NDRVWKXEWNMEEO-HVGANWHPSA-J
 
* common name:
 
* common name:
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** glutamate-5-semialdehyde_dehydrogenase
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** docosapentaenoyl-CoA
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/1.2.1.41 EC-1.2.1.41]
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** 1075.997   
 
* Synonym(s):
 
* Synonym(s):
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** (7Z,10Z,13Z,16Z,19Z)-docosa-7,10,13,16,19-pentaenoyl-CoA
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** (7Z,10Z,13Z,16Z,19Z)-docosapentaenoyl-CoA
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-13446]]
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** 1 [[NADPH]][c] '''+''' 1 [[L-GLUTAMATE-5-P]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c] '''+''' 1 [[NADP]][c]
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* [[RXN-16082]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 NADPH[c] '''+''' 1 γ-L-glutamyl 5-phosphate[c] '''+''' 1 H+[c] '''=>''' 1 phosphate[c] '''+''' 1 L-glutamate-5-semialdehyde[c] '''+''' 1 NADP+[c]
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* [[RXN-13445]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_16258]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_16634]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-6922]], L-Nδ-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-SYN4-PWY ARGININE-SYN4-PWY]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19541 19541]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=71581114 71581114]
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* LIGAND-RXN:
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* CHEBI:
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** [http://www.genome.jp/dbget-bin/www_bget?R03313 R03313]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=73870 73870]
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* UNIPROT:
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{{#set: smiles=CCC=CCC=CCC=CCC=CCC=CCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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** [http://www.uniprot.org/uniprot/Q9JUK8 Q9JUK8]
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{{#set: inchi key=InChIKey=NDRVWKXEWNMEEO-HVGANWHPSA-J}}
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** [http://www.uniprot.org/uniprot/P45121 P45121]
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{{#set: common name=docosapentaenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/P53000 P53000]
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{{#set: molecular weight=1075.997    }}
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** [http://www.uniprot.org/uniprot/P07004 P07004]
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{{#set: common name=(7Z,10Z,13Z,16Z,19Z)-docosa-7,10,13,16,19-pentaenoyl-CoA|(7Z,10Z,13Z,16Z,19Z)-docosapentaenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/P17857 P17857]
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{{#set: consumed by=RXN-13446|RXN-16082}}
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** [http://www.uniprot.org/uniprot/P45638 P45638]
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{{#set: produced by=RXN-13445}}
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** [http://www.uniprot.org/uniprot/P54885 P54885]
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** [http://www.uniprot.org/uniprot/O04226 O04226]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=glutamate-5-semialdehyde_dehydrogenase}}
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{{#set: ec number=EC-1.2.1.41}}
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{{#set: gene associated=Tiso_gene_16258|Tiso_gene_16634}}
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{{#set: in pathway=PWY-6922|PROSYN-PWY|ARGININE-SYN4-PWY|PWY-3341|CITRULBIO-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 19:51, 18 March 2018

Metabolite CPD-14426

  • smiles:
    • CCC=CCC=CCC=CCC=CCC=CCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
  • inchi key:
    • InChIKey=NDRVWKXEWNMEEO-HVGANWHPSA-J
  • common name:
    • docosapentaenoyl-CoA
  • molecular weight:
    • 1075.997
  • Synonym(s):
    • (7Z,10Z,13Z,16Z,19Z)-docosa-7,10,13,16,19-pentaenoyl-CoA
    • (7Z,10Z,13Z,16Z,19Z)-docosapentaenoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCC=CCC=CCC=CCC=CCC=CCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-" cannot be used as a page name in this wiki.




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