Difference between revisions of "Tiso gene 17239"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FRUCTOKINASE-RXN FRUCTOKINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** hexokinase *...")
(Created page with "Category:Gene == Gene Tiso_gene_17239 == * right end position: ** 2344 * transcription direction: ** NEGATIVE * left end position: ** 1376 * centisome position: ** 35.8800...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FRUCTOKINASE-RXN FRUCTOKINASE-RXN] ==
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== Gene Tiso_gene_17239 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2344
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* common name:
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* transcription direction:
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** hexokinase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.7.1.4 EC-2.7.1.4]
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** 1376
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* centisome position:
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** 35.880054   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1-PHOSPHATIDYLINOSITOL-KINASE-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[BETA-D-FRUCTOSE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[FRUCTOSE-6P]][c]
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* With common name(s):
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** 1 ATP[c] '''+''' 1 β-D-fructofuranose[c] '''=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 β-D-fructofuranose 6-phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_1303]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_17974]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_3107]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[orthology-creinhardtii]]
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== Pathways  ==
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* [[PWY-5384]], sucrose degradation IV (sucrose phosphorylase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5384 PWY-5384]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-621]], sucrose degradation III (sucrose invertase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-621 PWY-621]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[SUCUTIL-PWY]], sucrose degradation I (sucrose phosphotransferase): [http://metacyc.org/META/NEW-IMAGE?object=SUCUTIL-PWY SUCUTIL-PWY]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[SUCROSEUTIL2-PWY]], sucrose degradation VII (sucrose 3-dehydrogenase): [http://metacyc.org/META/NEW-IMAGE?object=SUCROSEUTIL2-PWY SUCROSEUTIL2-PWY]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-4101]], D-sorbitol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4101 PWY-4101]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6531]], mannitol cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6531 PWY-6531]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-3801]], sucrose degradation II (sucrose synthase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3801 PWY-3801]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
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** '''14''' reactions found over '''18''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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* [[PWY-6352]]
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* [[PWY-6351]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2344}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16125 16125]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=1376}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00760 R00760]
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{{#set: centisome position=35.880054    }}
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* UNIPROT:
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{{#set: reaction associated=1-PHOSPHATIDYLINOSITOL-KINASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q09124 Q09124]
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{{#set: pathway associated=PWY-6352|PWY-6351}}
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** [http://www.uniprot.org/uniprot/P24261 P24261]
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** [http://www.uniprot.org/uniprot/Q03417 Q03417]
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** [http://www.uniprot.org/uniprot/Q9V0T7 Q9V0T7]
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** [http://www.uniprot.org/uniprot/Q9CFI9 Q9CFI9]
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** [http://www.uniprot.org/uniprot/P22824 P22824]
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** [http://www.uniprot.org/uniprot/P26420 P26420]
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** [http://www.uniprot.org/uniprot/P26984 P26984]
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** [http://www.uniprot.org/uniprot/P37829 P37829]
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** [http://www.uniprot.org/uniprot/P43468 P43468]
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** [http://www.uniprot.org/uniprot/P73521 P73521]
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** [http://www.uniprot.org/uniprot/O82616 O82616]
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** [http://www.uniprot.org/uniprot/O04897 O04897]
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** [http://www.uniprot.org/uniprot/Q42645 Q42645]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=hexokinase}}
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{{#set: ec number=EC-2.7.1.4}}
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{{#set: gene associated=Tiso_gene_1303|Tiso_gene_17974|Tiso_gene_3107}}
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{{#set: in pathway=PWY-5384|PWY-621|SUCUTIL-PWY|SUCROSEUTIL2-PWY|PWY-4101|PWY-6531|PWY-3801|P122-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:34, 21 March 2018

Gene Tiso_gene_17239

  • right end position:
    • 2344
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 1376
  • centisome position:
    • 35.880054
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17239&oldid=42441"