Difference between revisions of "Tiso gene 17272"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7490 PWY-7490] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Gene == Gene Tiso_gene_17272 == * right end position: ** 2201 * transcription direction: ** POSITIVE * left end position: ** 2045 * centisome position: ** 53.6604...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Gene]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7490 PWY-7490] ==
+
== Gene Tiso_gene_17272 ==
−
* taxonomic range:
+
* right end position:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
+
** 2201
−
* common name:
+
* transcription direction:
−
** patulin biosynthesis
+
** POSITIVE
 +
* left end position:
 +
** 2045
 +
* centisome position:
 +
** 53.660458   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reactions associated ==
−
'''1''' reactions found over '''15''' reactions in the full pathway
+
* Reaction: [[CDPKIN-RXN]]
−
* [[2.3.1.165-RXN]]
+
** Source: [[annotation-in-silico_annotation]]
−
** 5 associated gene(s):
+
*** Assignment: ec-number
−
*** [[Tiso_gene_500]]
+
* Reaction: [[DADPKIN-RXN]]
−
*** [[Tiso_gene_136]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[Tiso_gene_13394]]
+
*** Assignment: ec-number
−
*** [[Tiso_gene_135]]
+
* Reaction: [[DCDPKIN-RXN]]
−
*** [[Tiso_gene_10876]]
+
** Source: [[annotation-in-silico_annotation]]
−
** 1 reconstruction source(s) associated:
+
*** Assignment: ec-number
−
*** [[annotation-in-silico_annotation]]
+
* Reaction: [[DGDPKIN-RXN]]
−
== Reaction(s) not found ==
+
** Source: [[annotation-in-silico_annotation]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.97-RXN 1.1.1.97-RXN]
+
*** Assignment: ec-number
−
* [http://metacyc.org/META/NEW-IMAGE?object=3-OH-BENZALDEHYDE-DEHYDROG-NADP+-RXN 3-OH-BENZALDEHYDE-DEHYDROG-NADP+-RXN]
+
* Reaction: [[DTDPKIN-RXN]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=6-METHYLSALICYLATE-DECARBOXYLASE-RXN 6-METHYLSALICYLATE-DECARBOXYLASE-RXN]
+
** Source: [[annotation-in-silico_annotation]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15470 RXN-15470]
+
*** Assignment: ec-number
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15472 RXN-15472]
+
* Reaction: [[DUDPKIN-RXN]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15473 RXN-15473]
+
** Source: [[annotation-in-silico_annotation]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15475 RXN-15475]
+
*** Assignment: ec-number
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15478 RXN-15478]
+
* Reaction: [[GDPKIN-RXN]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15480 RXN-15480]
+
** Source: [[annotation-in-silico_annotation]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15481 RXN-15481]
+
*** Assignment: ec-number
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15482 RXN-15482]
+
* Reaction: [[NUCLEOSIDE-DIP-KIN-RXN]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15483 RXN-15483]
+
** Source: [[annotation-in-silico_annotation]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15484 RXN-15484]
+
*** Assignment: ec-number
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15485 RXN-15485]
+
* Reaction: [[RXN-14120]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-14228]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[UDPKIN-RXN]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
== Pathways associated ==
 +
* [[PWY-7210]]
 +
* [[PWY-7198]]
 +
* [[PWY-7176]]
 +
* [[PWY-7220]]
 +
* [[PWY-7184]]
 +
* [[PWY-7222]]
 +
* [[PWY-7205]]
 +
* [[PWY-7224]]
 +
* [[PWY-7197]]
 +
* [[PWY0-166]]
 +
* [[PWY-7227]]
 +
* [[PPGPPMET-PWY]]
 +
* [[PWY-7226]]
 +
* [[PWY-7221]]
 +
* [[PWY-6545]]
 +
* [[PWY-7187]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-4751}}
+
{{#set: right end position=2201}}
−
{{#set: common name=patulin biosynthesis}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: reaction found=1}}
+
{{#set: left end position=2045}}
−
{{#set: total reaction=15}}
+
{{#set: centisome position=53.660458    }}
−
{{#set: completion rate=7.0}}
+
{{#set: reaction associated=CDPKIN-RXN|DADPKIN-RXN|DCDPKIN-RXN|DGDPKIN-RXN|DTDPKIN-RXN|DUDPKIN-RXN|GDPKIN-RXN|NUCLEOSIDE-DIP-KIN-RXN|RXN-14120|RXN-14228|UDPKIN-RXN}}
 +
{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7176|PWY-7220|PWY-7184|PWY-7222|PWY-7205|PWY-7224|PWY-7197|PWY0-166|PWY-7227|PPGPPMET-PWY|PWY-7226|PWY-7221|PWY-6545|PWY-7187}}

Latest revision as of 20:28, 21 March 2018

Gene Tiso_gene_17272

  • right end position:
    • 2201
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2045
  • centisome position:
    • 53.660458
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17272&oldid=41832"