Difference between revisions of "Tiso gene 17878"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15065 RXN-15065] == * direction: ** LEFT-TO-RIGHT * common name: ** phospholipase A2 ** abhydro...")
(Created page with "Category:Gene == Gene Tiso_gene_17878 == * right end position: ** 1771 * transcription direction: ** POSITIVE * left end position: ** 35 * centisome position: ** 1.0272968...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15065 RXN-15065] ==
+
== Gene Tiso_gene_17878 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 1771
−
* common name:
+
* transcription direction:
−
** phospholipase A2
+
** POSITIVE
−
** abhydrolase_domain-containing_protein_4-like
+
* left end position:
−
** ORF
+
** 35
−
* ec number:
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/3.1.1.4 EC-3.1.1.4]
+
** 1.0272968   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[AASP]]
−
** 1 [[WATER]][c] '''+''' 1 [[1-2-DIPALMITOYLPHOSPHATIDYLCHOLINE]][c] '''=>''' 1 [[CPD-8343]][c] '''+''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c]
+
** Source: [[orthology-creinhardtii]]
−
* With common name(s):
+
* Reaction: [[ADENYLYLSULFKIN-RXN]]
−
** 1 H2O[c] '''+''' 1 1,2-dipalmitoyl-phosphatidylcholine[c] '''=>''' 1 1-16:0-2-lysophosphatidylcholine[c] '''+''' 1 palmitate[c] '''+''' 1 H+[c]
+
** Source: [[orthology-athaliana]]
−
 
+
** Source: [[orthology-synechocystis]]
−
== Genes associated with this reaction  ==
+
** Source: [[orthology-creinhardtii]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** Source: [[orthology-creinhardtii]]
−
* [[Tiso_gene_15046]]
+
* Reaction: [[INORGPYROPHOSPHAT-RXN]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_12959]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_12960]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_15047]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-7416]], phospholipid remodeling (phosphatidylcholine, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7416 PWY-7416]
+
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: automated-name-match
 +
== Pathways associated ==
 +
* [[PWY-7805]]
 +
* [[PWY-7807]]
 +
* [[PWY-5340]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=1771}}
−
{{#set: common name=phospholipase A2}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=abhydrolase_domain-containing_protein_4-like}}
+
{{#set: left end position=35}}
−
{{#set: common name=ORF}}
+
{{#set: centisome position=1.0272968    }}
−
{{#set: ec number=EC-3.1.1.4}}
+
{{#set: reaction associated=AASP|ADENYLYLSULFKIN-RXN|INORGPYROPHOSPHAT-RXN}}
−
{{#set: gene associated=Tiso_gene_15046|Tiso_gene_12959|Tiso_gene_12960|Tiso_gene_15047}}
+
{{#set: pathway associated=PWY-7805|PWY-7807|PWY-5340}}
−
{{#set: in pathway=PWY-7416}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:37, 21 March 2018

Gene Tiso_gene_17878

  • right end position:
    • 1771
  • transcription direction:
    • POSITIVE
  • left end position:
    • 35
  • centisome position:
    • 1.0272968
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17878&oldid=42810"