Difference between revisions of "Tiso gene 18054"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD0-1108 CPD0-1108] == * smiles: ** C(C1(C(O)C(O)C(O)O1))O * inchi key: ** InChIKey=HMFHBZSHGG...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17877 RXN-17877] == * direction: ** LEFT-TO-RIGHT * common name: ** methionine_aminopeptidase *...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD0-1108 CPD0-1108] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17877 RXN-17877] ==
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* smiles:
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* direction:
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** C(C1(C(O)C(O)C(O)O1))O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=HMFHBZSHGGEWLO-TXICZTDVSA-N
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* common name:
 
* common name:
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** β-D-ribofuranose
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** methionine_aminopeptidase
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* molecular weight:
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* ec number:
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** 150.131   
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** [http://enzyme.expasy.org/EC/3.4.11.18 EC-3.4.11.18]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[WATER]][c] '''+''' 1 [[L-methionyl-L-threonyl-Protein]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[Protein-N-terminal-L-threonine]][c]
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* [[RXN-14904]]
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* With common name(s):
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* [[RXN0-5305]]
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** 1 H2O[c] '''+''' 1 an N-terminal-L-methionyl-L-threonyl-[protein][c] '''=>''' 1 L-methionine[c] '''+''' 1 an N-terminal L-threonyl-[protein][c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_5715]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_4247]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?C16639 C16639]
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{{#set: common name=methionine_aminopeptidase}}
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* CHEMSPIDER:
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{{#set: ec number=EC-3.4.11.18}}
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** [http://www.chemspider.com/Chemical-Structure.394477.html 394477]
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{{#set: gene associated=Tiso_gene_5715|Tiso_gene_4247}}
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* CHEBI:
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{{#set: in pathway=PWY-7800}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=47002 47002]
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{{#set: reconstruction category=annotation}}
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* PUBCHEM:
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=447347 447347]
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: smiles=C(C1(C(O)C(O)C(O)O1))O}}
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{{#set: inchi key=InChIKey=HMFHBZSHGGEWLO-TXICZTDVSA-N}}
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{{#set: common name=β-D-ribofuranose}}
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{{#set: molecular weight=150.131    }}
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{{#set: consumed or produced by=RXN-14904|RXN0-5305}}
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Revision as of 18:52, 18 March 2018

Reaction RXN-17877

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • methionine_aminopeptidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

  • Tiso_gene_5715
    • IN-SILICO_ANNOTATION
      • AUTOMATED-NAME-MATCH
    • EXPERIMENTAL_ANNOTATION
      • AUTOMATED-NAME-MATCH
  • Tiso_gene_4247
    • IN-SILICO_ANNOTATION
      • AUTOMATED-NAME-MATCH

Pathways

  • PWY-7800, Ac/N-end rule pathway: PWY-7800
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18054&oldid=20213"