Difference between revisions of "Tiso gene 18206"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPDEHYRHAMREDUCT-RXN DTDPDEHYRHAMREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** m...")
 
(Created page with "Category:Gene == Gene Tiso_gene_18206 == * right end position: ** 2321 * transcription direction: ** NEGATIVE * left end position: ** 116 * centisome position: ** 3.655846...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPDEHYRHAMREDUCT-RXN DTDPDEHYRHAMREDUCT-RXN] ==
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== Gene Tiso_gene_18206 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2321
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* common name:
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* transcription direction:
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** methionine_adenosyltransferase_regulatory_beta_subunit-related
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.1.1.133 EC-1.1.1.133]
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** 116
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* centisome position:
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** 3.655846   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PEPDEPHOS-RXN]]
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** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[DTDP-DEOH-DEOXY-MANNOSE]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[DTDP-RHAMNOSE]][c]
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** Source: [[annotation-experimental_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 dTDP-4-dehydro-β-L-rhamnose[c] '''=>''' 1 NADP+[c] '''+''' 1 dTDP-β-L-rhamnose[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-14117]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* [[Tiso_gene_4472]]
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** Source: [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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* Reaction: [[RXN-14192]]
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***EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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== Pathways  ==
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*** Assignment: ec-number
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* [[DTDPRHAMSYN-PWY]], dTDP-L-rhamnose biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DTDPRHAMSYN-PWY DTDPRHAMSYN-PWY]
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** Source: [[orthology-esiliculosus]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* Reaction: [[RXN-14207]]
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== Reconstruction information  ==
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** Source: [[annotation-experimental_annotation]]
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* [[annotation]]:
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*** Assignment: ec-number
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** [[pathwaytools]]:
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** Source: [[orthology-esiliculosus]]
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*** [[in-silico_annotation]]
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== Pathways associated ==
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* [[PWY-1042]]
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* [[P341-PWY]]
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* [[PWY-2221]]
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* [[GLYCOLYSIS]]
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* [[PWY-6901]]
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* [[ANAGLYCOLYSIS-PWY]]
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* [[P124-PWY]]
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* [[NPGLUCAT-PWY]]
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* [[PWY-7383]]
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* [[PWY-6886]]
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* [[PWY-5723]]
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* [[FERMENTATION-PWY]]
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* [[PWY-7218]]
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* [[PWY-6142]]
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* [[P122-PWY]]
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* [[PWY-5484]]
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* [[PWY-7003]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2321}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21796 21796]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=116}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02777 R02777]
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{{#set: centisome position=3.655846    }}
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* UNIPROT:
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{{#set: reaction associated=PEPDEPHOS-RXN|RXN-14117|RXN-14192|RXN-14207}}
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** [http://www.uniprot.org/uniprot/Q9JV74 Q9JV74]
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{{#set: pathway associated=PWY-1042|P341-PWY|PWY-2221|GLYCOLYSIS|PWY-6901|ANAGLYCOLYSIS-PWY|P124-PWY|NPGLUCAT-PWY|PWY-7383|PWY-6886|PWY-5723|FERMENTATION-PWY|PWY-7218|PWY-6142|P122-PWY|PWY-5484|PWY-7003}}
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** [http://www.uniprot.org/uniprot/P37760 P37760]
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** [http://www.uniprot.org/uniprot/Q46769 Q46769]
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** [http://www.uniprot.org/uniprot/O33664 O33664]
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** [http://www.uniprot.org/uniprot/O66251 O66251]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=methionine_adenosyltransferase_regulatory_beta_subunit-related}}
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{{#set: ec number=EC-1.1.1.133}}
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{{#set: gene associated=Tiso_gene_4472}}
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{{#set: in pathway=DTDPRHAMSYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:41, 21 March 2018

Gene Tiso_gene_18206

  • right end position:
    • 2321
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 116
  • centisome position:
    • 3.655846
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18206&oldid=43209"