Difference between revisions of "Tiso gene 18264"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9310 RXN-9310] == * direction: ** LEFT-TO-RIGHT * common name: ** protein_chloroplastic * ec nu...")
(Created page with "Category:Gene == Gene Tiso_gene_18264 == * right end position: ** 2497 * transcription direction: ** POSITIVE * left end position: ** 197 * centisome position: ** 6.287903...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9310 RXN-9310] ==
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== Gene Tiso_gene_18264 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2497
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* common name:
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* transcription direction:
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** protein_chloroplastic
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/4.2.99.20 EC-4.2.99.20]
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** 197
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* centisome position:
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** 6.2879033   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PHOSGLYPHOS-RXN]]
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** 1 [[CPD-9924]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[CPD-9923]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate[c] '''=>''' 1 pyruvate[c] '''+''' 1 (1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate[c]
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== Pathways associated ==
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* [[PWY-1042]]
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== Genes associated with this reaction  ==
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* [[PWY66-399]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[GLUCONEO-PWY]]
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* [[Tiso_gene_1922]]
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* [[SUCSYN-PWY]]
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** IN-SILICO_ANNOTATION
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* [[PWY-6901]]
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***EC-NUMBER
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* [[P124-PWY]]
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== Pathways  ==
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* [[GLYCOLYSIS]]
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* [[PWY-5837]], 1,4-dihydroxy-2-naphthoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5837 PWY-5837]
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* [[PWY-6886]]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[CALVIN-PWY]]
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== Reconstruction information  ==
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* [[ANAGLYCOLYSIS-PWY]]
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* [[annotation]]:
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* [[P122-PWY]]
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** [[pathwaytools]]:
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* [[P185-PWY]]
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*** [[in-silico_annotation]]
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* [[PWY-5484]]
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* [[PWY-7003]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2497}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25597 25597]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=197}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08166 R08166]
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{{#set: centisome position=6.2879033    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=PHOSGLYPHOS-RXN}}
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{{#set: common name=protein_chloroplastic}}
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{{#set: pathway associated=PWY-1042|PWY66-399|GLUCONEO-PWY|SUCSYN-PWY|PWY-6901|P124-PWY|GLYCOLYSIS|PWY-6886|CALVIN-PWY|ANAGLYCOLYSIS-PWY|P122-PWY|P185-PWY|PWY-5484|PWY-7003}}
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{{#set: ec number=EC-4.2.99.20}}
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{{#set: gene associated=Tiso_gene_1922}}
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{{#set: in pathway=PWY-5837}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:08, 21 March 2018

Gene Tiso_gene_18264

  • right end position:
    • 2497
  • transcription direction:
    • POSITIVE
  • left end position:
    • 197
  • centisome position:
    • 6.2879033
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18264&oldid=39752"