Difference between revisions of "Tiso gene 18328"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17428 RXN-17428] == * direction: ** LEFT-TO-RIGHT * common name: ** geranylgeranyl_diphosphate_...")
(Created page with "Category:Gene == Gene Tiso_gene_18328 == * right end position: ** 3032 * transcription direction: ** POSITIVE * left end position: ** 487 * centisome position: ** 15.76562...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17428 RXN-17428] ==
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== Gene Tiso_gene_18328 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3032
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* common name:
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* transcription direction:
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** geranylgeranyl_diphosphate_reductase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.3.1.83 EC-1.3.1.83]
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** 487
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* centisome position:
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** 15.765620   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN]]
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** 1 [[CPD-7005]][c] '''+''' 3 [[PROTON]][c] '''+''' 3 [[NADPH]][c] '''=>''' 3 [[NADP]][c] '''+''' 1 [[CHLOROPHYLL-A]][c]
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* With common name(s):
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** 1 geranylgeranyl chlorophyll a[c] '''+''' 3 H+[c] '''+''' 3 NADPH[c] '''=>''' 3 NADP+[c] '''+''' 1 chlorophyll a[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_2613]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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** Source: [[orthology-athaliana]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* Reaction: [[HPPD]]
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Reaction: [[RXN-10815]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[PWY-1581]]
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* [[PWY-7432]]
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* [[TYRFUMCAT-PWY]]
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* [[PWY-1422]]
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* [[PWY-6318]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3032}}
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{{#set: common name=geranylgeranyl_diphosphate_reductase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-1.3.1.83}}
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{{#set: left end position=487}}
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{{#set: gene associated=Tiso_gene_2613}}
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{{#set: centisome position=15.765620    }}
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{{#set: in pathway=}}
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{{#set: reaction associated=4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN|HPPD|RXN-10815}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: pathway associated=PWY-1581|PWY-7432|TYRFUMCAT-PWY|PWY-1422|PWY-6318}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-creinhardtii|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 21:24, 21 March 2018

Gene Tiso_gene_18328

  • right end position:
    • 3032
  • transcription direction:
    • POSITIVE
  • left end position:
    • 487
  • centisome position:
    • 15.765620
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18328&oldid=48542"