Difference between revisions of "Tiso gene 19047"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4142 RXNQT-4142] == * direction: ** LEFT-TO-RIGHT * common name: ** possible_l-galactose-1-ph...")
 
(Created page with "Category:Gene == Gene Tiso_gene_13653 == * left end position: ** 3646 * transcription direction: ** POSITIVE * right end position: ** 6139 * centisome position: ** 34.3573...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4142 RXNQT-4142] ==
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== Gene Tiso_gene_13653 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3646
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* common name:
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* transcription direction:
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** possible_l-galactose-1-phosphate_phosphatase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.1.3.93 EC-3.1.3.93]
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** 6139
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* centisome position:
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** 34.35733   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ATPASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CPDQT-4]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[L-Galactopyranose]][c]
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** experimental_annotation
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* With common name(s):
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***automated-name-match
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** 1 H2O[c] '''+''' 1 β-L-galactose 1-phosphate[c] '''=>''' 1 phosphate[c] '''+''' 1 L-galactopyranose[c]
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* [[NUCLEOSIDE-DIPHOSPHATASE-RXN]]
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** experimental_annotation
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== Genes associated with this reaction  ==
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***automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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* [[Tiso_gene_11614]]
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** experimental_annotation
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** [[pantograph]]-[[athaliana]]
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***automated-name-match
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-12195]]
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* [[Tiso_gene_10754]]
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** experimental_annotation
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** IN-SILICO_ANNOTATION
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***automated-name-match
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***AUTOMATED-NAME-MATCH
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* [[RXN-12196]]
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* [[Tiso_gene_15599]]
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** experimental_annotation
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** IN-SILICO_ANNOTATION
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***automated-name-match
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***AUTOMATED-NAME-MATCH
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* [[RXN-14024]]
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== Pathways  ==
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** experimental_annotation
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* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882]
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***automated-name-match
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** '''6''' reactions found over '''8''' reactions in the full pathway
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* [[RXN0-5462]]
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== Reconstruction information  ==
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** experimental_annotation
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* [[orthology]]:
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***automated-name-match
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** [[pantograph]]:
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== Pathways associated ==
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*** [[athaliana]]
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* [[PWY-7184]]
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*** [[esiliculosus]]
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* [[PWY-7198]]
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* [[annotation]]:
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* [[PWY-6545]]
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** [[pathwaytools]]:
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* [[PWY-7210]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3646}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26349 26349]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=6139}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07674 R07674]
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{{#set: centisome position=34.35733    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-DIPHOSPHATASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN-14024|RXN0-5462}}
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{{#set: common name=possible_l-galactose-1-phosphate_phosphatase}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: ec number=EC-3.1.3.93}}
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{{#set: gene associated=Tiso_gene_11614|Tiso_gene_10754|Tiso_gene_15599}}
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{{#set: in pathway=PWY-882}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:28, 10 January 2018

Gene Tiso_gene_13653

  • left end position:
    • 3646
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6139
  • centisome position:
    • 34.35733
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19047&oldid=17960"