Difference between revisions of "Tiso gene 19254"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALDOSE-1-EPIMERASE-RXN ALDOSE-1-EPIMERASE-RXN] == * direction: ** REVERSIBLE * common name: ** aldo...")
(Created page with "Category:Gene == Gene Tiso_gene_19254 == * right end position: ** 1610 * transcription direction: ** POSITIVE * left end position: ** 392 * centisome position: ** 15.80645...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALDOSE-1-EPIMERASE-RXN ALDOSE-1-EPIMERASE-RXN] ==
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== Gene Tiso_gene_19254 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 1610
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* common name:
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* transcription direction:
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** aldose_1-epimerase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/5.1.3.3 EC-5.1.3.3]
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** 392
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* centisome position:
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** 15.806452   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PYRROLINECARBREDUCT-RXN]]
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** 1 [[ALPHA-GLUCOSE]][c] '''<=>''' 1 [[GLC]][c]
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* With common name(s):
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** 1 &alpha;-D-glucopyranose[c] '''<=>''' 1 &beta;-D-glucopyranose[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_19779]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-athaliana]]
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* Gene: [[Tiso_gene_17734]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN66-546]]
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* [[PWY0-1466]], trehalose degradation VI (periplasmic): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1466 PWY0-1466]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PROSYN-PWY]]
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* [[ARG-PRO-PWY]]
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* [[PWY-6344]]
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* [[PWY-4981]]
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* [[PWY-3341]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=1610}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10264 10264]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=392}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01602 R01602]
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{{#set: centisome position=15.806452    }}
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* UNIPROT:
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{{#set: reaction associated=PYRROLINECARBREDUCT-RXN|RXN66-546}}
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** [http://www.uniprot.org/uniprot/P05149 P05149]
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{{#set: pathway associated=PROSYN-PWY|ARG-PRO-PWY|PWY-6344|PWY-4981|PWY-3341}}
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** [http://www.uniprot.org/uniprot/Q8X8E4 Q8X8E4]
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** [http://www.uniprot.org/uniprot/P21955 P21955]
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** [http://www.uniprot.org/uniprot/P31765 P31765]
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** [http://www.uniprot.org/uniprot/Q9CFG9 Q9CFG9]
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** [http://www.uniprot.org/uniprot/P0A9C3 P0A9C3]
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** [http://www.uniprot.org/uniprot/Q9JSW7 Q9JSW7]
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** [http://www.uniprot.org/uniprot/Q9WYB8 Q9WYB8]
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** [http://www.uniprot.org/uniprot/Q9CE62 Q9CE62]
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** [http://www.uniprot.org/uniprot/Q7M2P6 Q7M2P6]
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** [http://www.uniprot.org/uniprot/O48971 O48971]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=aldose_1-epimerase}}
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{{#set: ec number=EC-5.1.3.3}}
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{{#set: gene associated=Tiso_gene_19779|Tiso_gene_17734}}
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{{#set: in pathway=PWY0-1466}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 21:16, 21 March 2018

Gene Tiso_gene_19254

  • right end position:
    • 1610
  • transcription direction:
    • POSITIVE
  • left end position:
    • 392
  • centisome position:
    • 15.806452
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19254&oldid=47319"