Difference between revisions of "Tiso gene 19322"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-GLU-AMINOTRANSFERASE-RXN ORNITHINE-GLU-AMINOTRANSFERASE-RXN] == * direction: ** REVERSIBL...")
 
(Created page with "Category:Gene == Gene Tiso_gene_17170 == * left end position: ** 2287 * transcription direction: ** NEGATIVE * right end position: ** 3627 * centisome position: ** 59.1108...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-GLU-AMINOTRANSFERASE-RXN ORNITHINE-GLU-AMINOTRANSFERASE-RXN] ==
+
== Gene Tiso_gene_17170 ==
−
* direction:
+
* left end position:
−
** REVERSIBLE
+
** 2287
−
* common name:
+
* transcription direction:
−
** Ornithine--oxo-glutarate aminotransferase
+
** NEGATIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/2.6.1.13 EC-2.6.1.13]
+
** 3627
 +
* centisome position:
 +
** 59.110878   
 
* Synonym(s):
 
* Synonym(s):
 +
** FNR
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[1.18.1.2-RXN]]
−
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ORNITHINE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***ec-number
−
** 1 2-oxoglutarate[c] '''+''' 1 L-ornithine[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 L-glutamate-5-semialdehyde[c]
+
** experimental_annotation
−
 
+
***ec-number
−
== Genes associated with this reaction  ==
+
* [[RXN-17897]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** in-silico_annotation
−
* [[Tiso_gene_11231]]
+
***ec-number
−
** [[pantograph]]-[[synechocystis]]
+
** experimental_annotation
−
== Pathways  ==
+
***ec-number
−
* [[ARGASEDEG-PWY]], L-arginine degradation I (arginase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGASEDEG-PWY ARGASEDEG-PWY]
+
== Pathways associated ==
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-7230]]
−
* [[PWY-6922]], L-N&delta;-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
+
* [[PWY-101]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344]
+
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
+
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981]
+
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
−
* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-SYN4-PWY ARGININE-SYN4-PWY]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
+
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[synechocystis]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=2287}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25160 25160]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=3627}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00667 R00667]
+
{{#set: centisome position=59.110878    }}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: common name=FNR}}
−
{{#set: common name=Ornithine--oxo-glutarate aminotransferase}}
+
{{#set: reaction associated=1.18.1.2-RXN|RXN-17897}}
−
{{#set: ec number=EC-2.6.1.13}}
+
{{#set: pathway associated=PWY-7230|PWY-101}}
−
{{#set: gene associated=Tiso_gene_11231}}
+
−
{{#set: in pathway=ARGASEDEG-PWY|PWY-6922|PWY-6344|PWY-3341|ARG-PRO-PWY|PWY-4981|ARGININE-SYN4-PWY|CITRULBIO-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=synechocystis}}
+

Revision as of 18:31, 10 January 2018

Gene Tiso_gene_17170

  • left end position:
    • 2287
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3627
  • centisome position:
    • 59.110878
  • Synonym(s):
    • FNR

Reactions associated

  • 1.18.1.2-RXN
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-17897
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19322&oldid=18232"