Difference between revisions of "Tiso gene 19961"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CERAMIDASE-YEAST-RXN CERAMIDASE-YEAST-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://en...")
(Created page with "Category:Gene == Gene Tiso_gene_19961 == * right end position: ** 1487 * transcription direction: ** NEGATIVE * left end position: ** 51 * centisome position: ** 2.7055702...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CERAMIDASE-YEAST-RXN CERAMIDASE-YEAST-RXN] ==
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== Gene Tiso_gene_19961 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 1487
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/3.5.1.23 EC-3.5.1.23]
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** NEGATIVE
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* left end position:
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** 51
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* centisome position:
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** 2.7055702   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[TRIOSEPISOMERIZATION-RXN]]
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** 1 [[Alpha-hydroxyphytoceramides]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[2-Hydroxy-Fatty-Acids]][c] '''+''' 1 [[PHYTOSPINGOSINE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 a (2'R)-2'-hydroxy-phytoceramide[c] '''+''' 1 H2O[c] '''<=>''' 1 a (2R)-2-hydroxy fatty acid[c] '''+''' 1 phytosphingosine[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-athaliana]]
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* Gene: [[Tiso_gene_14341]]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY-7119]], sphingolipid recycling and degradation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7119 PWY-7119]
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** '''5''' reactions found over '''11''' reactions in the full pathway
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* [[PWY66-388]], fatty acid &alpha;-oxidation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-388 PWY66-388]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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== Pathways associated ==
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* [[PWY-1042]]
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* [[P341-PWY]]
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* [[PWY66-399]]
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* [[P185-PWY]]
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* [[GLUCONEO-PWY]]
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* [[GLYCOLYSIS]]
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* [[PWY-6142]]
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* [[CALVIN-PWY]]
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* [[ANAGLYCOLYSIS-PWY]]
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* [[PWY-5484]]
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* [[PWY66-373]]
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* [[PWY-7003]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=REVERSIBLE}}
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{{#set: right end position=1487}}
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{{#set: ec number=EC-3.5.1.23}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: gene associated=Tiso_gene_14341}}
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{{#set: left end position=51}}
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{{#set: in pathway=PWY-7119|PWY66-388}}
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{{#set: centisome position=2.7055702    }}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction associated=TRIOSEPISOMERIZATION-RXN}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: pathway associated=PWY-1042|P341-PWY|PWY66-399|P185-PWY|GLUCONEO-PWY|GLYCOLYSIS|PWY-6142|CALVIN-PWY|ANAGLYCOLYSIS-PWY|PWY-5484|PWY66-373|PWY-7003}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:28, 21 March 2018

Gene Tiso_gene_19961

  • right end position:
    • 1487
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 51
  • centisome position:
    • 2.7055702
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19961&oldid=41873"