Difference between revisions of "Tiso gene 2019"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1141 RXN0-1141] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate--GcvH protein ligas...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7417 CPD-7417] == * smiles: ** C(C2(OC(OC1(C=CC=CC=1C=CC(=O)[O-]))C(C(C2O)O)O))O * common n...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1141 RXN0-1141] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7417 CPD-7417] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(C2(OC(OC1(C=CC=CC=1C=CC(=O)[O-]))C(C(C2O)O)O))O
 
* common name:
 
* common name:
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** lipoate--GcvH protein ligase
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** cis-coumarinic acid-β-D-glucoside
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** lipoate-protein_ligase_a
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* inchi key:
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** lipoate-protein_ligase
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** InChIKey=GVRIYIMNJGULCZ-QLFWQTQQSA-M
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/6.3.1.20 EC-6.3.1.20]
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** 325.294   
 
* Synonym(s):
 
* Synonym(s):
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** coumarinic acid glucoside
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** coumarinate glucoside
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-8036]]
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** 1 [[Gcv-H]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[LIPOIC-ACID]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[PROTEIN-LIPOYLLYSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[AMP]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 [glycine cleavage system lipoyl-carrier protein]-L-lysine[c] '''+''' 1 ATP[c] '''+''' 1 (R)-lipoate[c] '''=>''' 1 diphosphate[c] '''+''' 1 a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine[c] '''+''' 1 H+[c] '''+''' 1 AMP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_4493]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_17216]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_17215]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_4494]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_8713]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=lipoate--GcvH protein ligase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C05839 C05839]
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{{#set: common name=lipoate-protein_ligase_a}}
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* HMDB : HMDB60077
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{{#set: common name=lipoate-protein_ligase}}
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* CHEBI:
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{{#set: ec number=EC-6.3.1.20}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=62223 62223]
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{{#set: gene associated=Tiso_gene_4493|Tiso_gene_17216|Tiso_gene_17215|Tiso_gene_4494|Tiso_gene_8713}}
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* PUBCHEM:
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{{#set: in pathway=}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25796113 25796113]
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{{#set: reconstruction category=annotation}}
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{{#set: smiles=C(C2(OC(OC1(C=CC=CC=1C=CC(=O)[O-]))C(C(C2O)O)O))O}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: common name=cis-coumarinic acid-β-D-glucoside}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: inchi key=InChIKey=GVRIYIMNJGULCZ-QLFWQTQQSA-M}}
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{{#set: molecular weight=325.294    }}
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{{#set: common name=coumarinic acid glucoside|coumarinate glucoside}}
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{{#set: consumed by=RXN-8036}}

Revision as of 15:58, 21 March 2018

Metabolite CPD-7417

  • smiles:
    • C(C2(OC(OC1(C=CC=CC=1C=CC(=O)[O-]))C(C(C2O)O)O))O
  • common name:
    • cis-coumarinic acid-β-D-glucoside
  • inchi key:
    • InChIKey=GVRIYIMNJGULCZ-QLFWQTQQSA-M
  • molecular weight:
    • 325.294
  • Synonym(s):
    • coumarinic acid glucoside
    • coumarinate glucoside

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C(C2(OC(OC1(C=CC=CC=1C=CC(=O)[O-]))C(C(C2O)O)O))O" cannot be used as a page name in this wiki.



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