Difference between revisions of "Tiso gene 20270"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1401 RXN0-1401] == * direction: ** LEFT-TO-RIGHT * common name: ** thymidine_phosphorylase * e...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14276 RXN-14276] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1401 RXN0-1401] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14276 RXN-14276] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** thymidine_phosphorylase
 
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/2.7.4.23 EC-2.7.4.23]
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** [http://enzyme.expasy.org/EC/4.2.1.119 EC-4.2.1.119]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[RIBOSE-15-BISPHOSPHATE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PRPP]][c]
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** 1 [[WATER]][c] '''+''' 1 [[CPD0-2108]][c] '''=>''' 1 [[CPD-14916]][c]
 
* With common name(s):
 
* With common name(s):
** 1 α-D-ribose 1,5-bisphosphate[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 5-phospho-α-D-ribose 1-diphosphate[c]
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** 1 H2O[c] '''+''' 1 trans-oct-2-enoyl-CoA[c] '''=>''' 1 (R)-3-hydroxyoctanoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_1011]]
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* [[Tiso_gene_6885]]
** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[esiliculosus]]
***EC-NUMBER
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* [[Tiso_gene_14262]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_16145]]
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** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-7805]], aminomethylphosphonate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7805 PWY-7805]
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* [[PWY-6920]], 6-gingerol analog biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6920 PWY-6920]
** '''2''' reactions found over '''8''' reactions in the full pathway
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** '''5''' reactions found over '''6''' reactions in the full pathway
* [[PWY0-661]], PRPP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-661 PWY0-661]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7807]], glyphosate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7807 PWY-7807]
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** '''2''' reactions found over '''7''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[annotation]]:
+
* [[orthology]]:
** [[pathwaytools]]:
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** [[pantograph]]:
*** [[in-silico_annotation]]
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*** [[esiliculosus]]
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20109 20109]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R06836 R06836]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=thymidine_phosphorylase}}
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{{#set: ec number=EC-4.2.1.119}}
{{#set: ec number=EC-2.7.4.23}}
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{{#set: gene associated=Tiso_gene_6885|Tiso_gene_14262|Tiso_gene_16145}}
{{#set: gene associated=Tiso_gene_1011}}
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{{#set: in pathway=PWY-6920}}
{{#set: in pathway=PWY-7805|PWY0-661|PWY-7807}}
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{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=esiliculosus}}
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 18:01, 10 January 2018

Reaction RXN-14276

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 trans-oct-2-enoyl-CoA[c] => 1 (R)-3-hydroxyoctanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6920, 6-gingerol analog biosynthesis (engineered): PWY-6920
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links