Difference between revisions of "Tiso gene 20412"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOISOCAPROATE-RXN KETOISOCAPROATE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-methy...")
(Created page with "Category:Gene == Gene Tiso_gene_20412 == * right end position: ** 325 * transcription direction: ** POSITIVE * left end position: ** 2 * centisome position: ** 0.14430015...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOISOCAPROATE-RXN KETOISOCAPROATE-RXN] ==
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== Gene Tiso_gene_20412 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 325
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* common name:
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* transcription direction:
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** 4-methyl-2-oxopentanoate dehydrogenase (lipoamide)
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** POSITIVE
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** 2-oxoisovalerate_dehydrogenase_alpha_subunit_mitochondrial
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* left end position:
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* ec number:
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** 2
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** [http://enzyme.expasy.org/EC/1.2.4.4 EC-1.2.4.4]
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* centisome position:
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** 0.14430015   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[6PGLUCONOLACT-RXN]]
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** 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[BCAA-dehydrogenase-3MB-DH-lipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* With common name(s):
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** 1 an [apo BCAA dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 4-methyl-2-oxopentanoate[c] '''+''' 1 H+[c] '''=>''' 1 a [apo BCAA dehydrogenase E2 protein] N6-S-[3-methylbutanoyl]dihydrolipoyl-L-lysine[c] '''+''' 1 CO2[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_18084]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_3260]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[P122-PWY]]
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* [[RUMP-PWY]]
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* [[OXIDATIVEPENT-PWY]]
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* [[GLYCOLYSIS-E-D]]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: right end position=325}}
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** [http://www.uniprot.org/uniprot/P21839 P21839]
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{{#set: transcription direction=POSITIVE}}
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** [http://www.uniprot.org/uniprot/P21953 P21953]
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{{#set: left end position=2}}
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** [http://www.uniprot.org/uniprot/P37940 P37940]
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{{#set: centisome position=0.14430015    }}
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** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
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{{#set: reaction associated=6PGLUCONOLACT-RXN}}
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** [http://www.uniprot.org/uniprot/P37941 P37941]
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{{#set: pathway associated=P122-PWY|RUMP-PWY|OXIDATIVEPENT-PWY|GLYCOLYSIS-E-D}}
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** [http://www.uniprot.org/uniprot/P11178 P11178]
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** [http://www.uniprot.org/uniprot/P12694 P12694]
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** [http://www.uniprot.org/uniprot/P09061 P09061]
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** [http://www.uniprot.org/uniprot/P09060 P09060]
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** [http://www.uniprot.org/uniprot/P11960 P11960]
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** [http://www.uniprot.org/uniprot/O84344 O84344]
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** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
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** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
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** [http://www.uniprot.org/uniprot/P35738 P35738]
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** [http://www.uniprot.org/uniprot/P50136 P50136]
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** [http://www.uniprot.org/uniprot/O48615 O48615]
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** [http://www.uniprot.org/uniprot/O03849 O03849]
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** [http://www.uniprot.org/uniprot/Q53592 Q53592]
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** [http://www.uniprot.org/uniprot/Q53593 Q53593]
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** [http://www.uniprot.org/uniprot/O82450 O82450]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=4-methyl-2-oxopentanoate dehydrogenase (lipoamide)}}
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{{#set: common name=2-oxoisovalerate_dehydrogenase_alpha_subunit_mitochondrial}}
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{{#set: ec number=EC-1.2.4.4}}
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{{#set: gene associated=Tiso_gene_18084|Tiso_gene_3260}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:57, 21 March 2018

Gene Tiso_gene_20412

  • right end position:
    • 325
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2
  • centisome position:
    • 0.14430015
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_20412&oldid=44919"