Difference between revisions of "Tiso gene 292"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-DEOXYRIBOSE 2-DEOXYRIBOSE] == * smiles: ** C(O)C(O)C(O)CC=O * inchi key: ** InChIKey=ASJSAQIR...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2044 RXN0-2044] == * direction: ** REVERSIBLE * common name: ** hydroxyacyl-coenzyme_a_dehydro...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-DEOXYRIBOSE 2-DEOXYRIBOSE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2044 RXN0-2044] ==
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* smiles:
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* direction:
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** C(O)C(O)C(O)CC=O
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** REVERSIBLE
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* inchi key:
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** InChIKey=ASJSAQIRZKANQN-UHFFFAOYSA-N
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* common name:
 
* common name:
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** 2'-deoxyribose
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** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
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* molecular weight:
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** 3-hydroxyacyl-_dehydrogenase
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** 134.132   
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** hydroxyacyl-coenzyme_a_mitochondrial
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
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** deoxyribose
 
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** 2-deoxyribose
 
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** 2-deoxy-D-ribose
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[NAD]][c] '''+''' 1 [[3-HYDROXYADIPYL-COA]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[3-KETO-ADIPYL-COA]][c] '''+''' 1 [[PROTON]][c]
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* [[RXN-14223]]
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* With common name(s):
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** 1 NAD+[c] '''+''' 1 (3S)-hydroxyadipyl-CoA[c] '''<=>''' 1 NADH[c] '''+''' 1 3-oxoadipyl-CoA[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_18839]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14027]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_18838]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5857]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14026]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14262]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-1361]], benzoyl-CoA degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1361 PWY-1361]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY0-321]], phenylacetate degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-321 PWY0-321]
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** '''2''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* CAS : 533-67-5
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34851 34851]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=10786 10786]
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* LIGAND-RXN:
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* HMDB : HMDB03224
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** [http://www.genome.jp/dbget-bin/www_bget?R06941 R06941]
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* LIGAND-CPD:
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{{#set: direction=REVERSIBLE}}
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** [http://www.genome.jp/dbget-bin/www_bget?C01801 C01801]
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{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
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* CHEMSPIDER:
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{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
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** [http://www.chemspider.com/Chemical-Structure.10330.html 10330]
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{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
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* CHEBI:
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{{#set: ec number=EC-1.1.1.35}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=131350 131350]
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{{#set: gene associated=Tiso_gene_18839|Tiso_gene_14027|Tiso_gene_18838|Tiso_gene_5857|Tiso_gene_14026|Tiso_gene_14262}}
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* METABOLIGHTS : MTBLC28816
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{{#set: in pathway=PWY-1361|PWY0-321}}
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{{#set: smiles=C(O)C(O)C(O)CC=O}}
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{{#set: reconstruction category=orthology}}
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{{#set: inchi key=InChIKey=ASJSAQIRZKANQN-UHFFFAOYSA-N}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: common name=2'-deoxyribose}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: molecular weight=134.132    }}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=deoxyribose|2-deoxyribose|2-deoxy-D-ribose}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: consumed or produced by=RXN-14223}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 18:36, 10 January 2018

Reaction RXN0-2044

  • direction:
    • REVERSIBLE
  • common name:
    • hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
    • 3-hydroxyacyl-_dehydrogenase
    • hydroxyacyl-coenzyme_a_mitochondrial
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-1361, benzoyl-CoA degradation I (aerobic): PWY-1361
    • 2 reactions found over 7 reactions in the full pathway
  • PWY0-321, phenylacetate degradation I (aerobic): PWY0-321
    • 2 reactions found over 9 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_292&oldid=18664"