Difference between revisions of "Tiso gene 3314"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14048 RXN-14048] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
(Created page with "Category:Gene == Gene Tiso_gene_3314 == * right end position: ** 14388 * transcription direction: ** POSITIVE * left end position: ** 11991 * centisome position: ** 70.411...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14048 RXN-14048] ==
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== Gene Tiso_gene_3314 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 14388
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* transcription direction:
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** POSITIVE
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* left end position:
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** 11991
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* centisome position:
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** 70.41104   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
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** 1 [[L-CYSTATHIONINE]][c] '''=>''' 1 [[CPD-15056]][c] '''+''' 1 [[CYS]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[orthology-esiliculosus]]
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* With common name(s):
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* Reaction: [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
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** 1 L-cystathionine[c] '''=>''' 1 (2Z)-2-aminobut-2-enoate[c] '''+''' 1 L-cysteine[c] '''+''' 1 H+[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-15684]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* Gene: [[Tiso_gene_3732]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* Reaction: [[THIOL-OXIDASE-RXN]]
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* [[HOMOCYSDEGR-PWY]], L-cysteine biosynthesis III (from L-homocysteine): [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSDEGR-PWY HOMOCYSDEGR-PWY]
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** Source: [[annotation-in-silico_annotation]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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*** Assignment: ec-number
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* [[PWY-801]], L-homocysteine and L-cysteine interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-801 PWY-801]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* [[PWY-7539]]
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* [[PWY-7533]]
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* [[PWY-6797]]
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* [[PWY-6147]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=14388}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24913 24913]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=11991}}
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{{#set: gene associated=Tiso_gene_3732}}
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{{#set: centisome position=70.41104    }}
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{{#set: in pathway=HOMOCYSDEGR-PWY|PWY-801}}
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{{#set: reaction associated=DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN|H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN|RXN-15684|THIOL-OXIDASE-RXN}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY-7539|PWY-7533|PWY-6797|PWY-6147}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 21:10, 21 March 2018

Gene Tiso_gene_3314

  • right end position:
    • 14388
  • transcription direction:
    • POSITIVE
  • left end position:
    • 11991
  • centisome position:
    • 70.41104
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3314&oldid=46582"