Difference between revisions of "Tiso gene 3314"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14917 RXN-14917] == * direction: ** LEFT-TO-RIGHT * common name: ** mpbq_msbq_methyltransferase...")
 
(Created page with "Category:Gene == Gene Tiso_gene_3314 == * right end position: ** 14388 * transcription direction: ** POSITIVE * left end position: ** 11991 * centisome position: ** 70.411...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14917 RXN-14917] ==
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== Gene Tiso_gene_3314 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 14388
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* common name:
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* transcription direction:
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** mpbq_msbq_methyltransferase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.1.1.295 EC-2.1.1.295]
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** 11991
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* centisome position:
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** 70.41104   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[CPD-11712]][c] '''=>''' 1 [[CPD-15834]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[orthology-esiliculosus]]
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* With common name(s):
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* Reaction: [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 2-methyl-6-geranylgeranyl-1,4-benzoquinol[c] '''=>''' 1 2,3-dimethyl-6-geranylgeranyl-1,4-benzoquinol[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-15684]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* [[Tiso_gene_2596]]
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** Source: [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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* Reaction: [[THIOL-OXIDASE-RXN]]
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***AUTOMATED-NAME-MATCH
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** Source: [[annotation-in-silico_annotation]]
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== Pathways ==
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*** Assignment: ec-number
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* [[PWY-7436]], vitamin E biosynthesis (tocotrienols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7436 PWY-7436]
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** Source: [[orthology-esiliculosus]]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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== Pathways associated ==
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== Reconstruction information  ==
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* [[PWY-7539]]
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* [[annotation]]:
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* [[PWY-7533]]
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** [[pathwaytools]]:
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* [[PWY-6797]]
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*** [[in-silico_annotation]]
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* [[PWY-6147]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=14388}}
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{{#set: common name=mpbq_msbq_methyltransferase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-2.1.1.295}}
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{{#set: left end position=11991}}
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{{#set: gene associated=Tiso_gene_2596}}
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{{#set: centisome position=70.41104    }}
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{{#set: in pathway=PWY-7436}}
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{{#set: reaction associated=DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN|H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN|RXN-15684|THIOL-OXIDASE-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-7539|PWY-7533|PWY-6797|PWY-6147}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 21:10, 21 March 2018

Gene Tiso_gene_3314

  • right end position:
    • 14388
  • transcription direction:
    • POSITIVE
  • left end position:
    • 11991
  • centisome position:
    • 70.41104
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3314&oldid=46582"