Difference between revisions of "Tiso gene 3577"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIPHTINE--AMMONIA-LIGASE-RXN DIPHTINE--AMMONIA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7280 CPD-7280] == * smiles: ** CC(C=CC=C(C)C=CC12(OC(CC(O)CC(C)(C)1)2))=CC=CC=C(C)CC=O * in...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIPHTINE--AMMONIA-LIGASE-RXN DIPHTINE--AMMONIA-LIGASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7280 CPD-7280] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(C=CC=C(C)C=CC12(OC(CC(O)CC(C)(C)1)2))=CC=CC=C(C)CC=O
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* inchi key:
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** InChIKey=FYYDCJDEFSYVOY-WENURHBKSA-N
 
* common name:
 
* common name:
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** endoribonuclease_l-psp_domain-containing_protein
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** (3S,5R,6S)-5,6-epoxy-3-hydroxy-5,6-dihydro-12'-apo-β-caroten-12'-al
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/6.3.1.14 EC-6.3.1.14]
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** 382.542   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[DIPHTINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[DIPHTHAMIDE]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
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* [[RXN-7974]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 ammonium[c] '''+''' 1 ATP[c] '''+''' 1 a diphthine-[translation elongation factor 2][c] '''=>''' 1 H+[c] '''+''' 1 a diphthamide-[translation elongation factor 2][c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_3764]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6482]], diphthamide biosynthesis (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6482 PWY-6482]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7546]], diphthamide biosynthesis (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7546 PWY-7546]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19753 19753]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25246021 25246021]
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* LIGAND-RXN:
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{{#set: smiles=CC(C=CC=C(C)C=CC12(OC(CC(O)CC(C)(C)1)2))=CC=CC=C(C)CC=O}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03613 R03613]
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{{#set: inchi key=InChIKey=FYYDCJDEFSYVOY-WENURHBKSA-N}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=(3S,5R,6S)-5,6-epoxy-3-hydroxy-5,6-dihydro-12'-apo-β-caroten-12'-al}}
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{{#set: common name=endoribonuclease_l-psp_domain-containing_protein}}
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{{#set: molecular weight=382.542    }}
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{{#set: ec number=EC-6.3.1.14}}
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{{#set: produced by=RXN-7974}}
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{{#set: gene associated=Tiso_gene_3764}}
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{{#set: in pathway=PWY-6482|PWY-7546}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 17:41, 10 January 2018

Metabolite CPD-7280

  • smiles:
    • CC(C=CC=C(C)C=CC12(OC(CC(O)CC(C)(C)1)2))=CC=CC=C(C)CC=O
  • inchi key:
    • InChIKey=FYYDCJDEFSYVOY-WENURHBKSA-N
  • common name:
    • (3S,5R,6S)-5,6-epoxy-3-hydroxy-5,6-dihydro-12'-apo-β-caroten-12'-al
  • molecular weight:
    • 382.542
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links



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