Difference between revisions of "Tiso gene 3856"

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(Created page with "Category:Gene == Gene Tiso_gene_3856 == * right end position: ** 3334 * transcription direction: ** NEGATIVE * left end position: ** 1467 * centisome position: ** 9.21193...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3162 PWY-3162] ==
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== Gene Tiso_gene_3856 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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** 3334
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* common name:
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* transcription direction:
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** L-tryptophan degradation V (side chain pathway)
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** NEGATIVE
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* left end position:
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** 1467
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* centisome position:
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** 9.21193   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''2''' reactions found over '''13''' reactions in the full pathway
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* Reaction: [[KETOACYLCOATHIOL-RXN]]
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* [[RXN-5424]]
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-5581]]
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*** Assignment: ec-number
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== Reaction(s) not found ==
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* Reaction: [[RXN-10699]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5402 RXN-5402]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5403 RXN-5403]
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*** Assignment: ec-number
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5421 RXN-5421]
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* Reaction: [[RXN-10700]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5422 RXN-5422]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5423 RXN-5423]
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*** Assignment: ec-number
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5441 RXN-5441]
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* Reaction: [[RXN-10701]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5442 RXN-5442]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5443 RXN-5443]
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*** Assignment: ec-number
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5444 RXN-5444]
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* Reaction: [[RXN-11246]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5445 RXN-5445]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5603 RXN-5603]
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*** Assignment: ec-number
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* Reaction: [[RXN-12565]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12710]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-13617]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14268]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14274]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14277]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14394]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14774]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14788]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14793]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14799]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14803]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16137]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17116]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17778]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17782]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17787]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17791]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17795]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17799]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6435]]
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* [[PWY-7654]]
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* [[PWY66-391]]
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* [[PWY-7606]]
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* [[PWY-7337]]
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* [[PWY-7340]]
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* [[PWY-7338]]
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* [[PWY-7094]]
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* [[PWY-6946]]
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* [[FAO-PWY]]
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* [[PWY-735]]
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* [[PWY-5136]]
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* [[PWY-7726]]
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* [[PWY-6863]]
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* [[PWY-7339]]
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* [[PWY-6948]]
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* [[PWY-7288]]
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* [[PWY-6945]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-1224}}
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{{#set: right end position=3334}}
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{{#set: common name=L-tryptophan degradation V (side chain pathway)}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: reaction found=2}}
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{{#set: left end position=1467}}
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{{#set: reaction not found=13}}
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{{#set: centisome position=9.21193    }}
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{{#set: completion rate=15.0}}
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{{#set: reaction associated=KETOACYLCOATHIOL-RXN|RXN-10699|RXN-10700|RXN-10701|RXN-11246|RXN-12565|RXN-12710|RXN-13617|RXN-14268|RXN-14274|RXN-14277|RXN-14394|RXN-14774|RXN-14788|RXN-14793|RXN-14799|RXN-14803|RXN-16137|RXN-17116|RXN-17778|RXN-17782|RXN-17787|RXN-17791|RXN-17795|RXN-17799}}
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{{#set: pathway associated=PWY-6435|PWY-7654|PWY66-391|PWY-7606|PWY-7337|PWY-7340|PWY-7338|PWY-7094|PWY-6946|FAO-PWY|PWY-735|PWY-5136|PWY-7726|PWY-6863|PWY-7339|PWY-6948|PWY-7288|PWY-6945}}

Latest revision as of 20:26, 21 March 2018

Gene Tiso_gene_3856

  • right end position:
    • 3334
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 1467
  • centisome position:
    • 9.21193
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3856&oldid=41585"