Difference between revisions of "Tiso gene 4076"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.8.11-RXN 2.7.8.11-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
(Created page with "Category:Gene == Gene Tiso_gene_2450 == * left end position: ** 8043 * transcription direction: ** POSITIVE * right end position: ** 8413 * centisome position: ** 41.44808...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.8.11-RXN 2.7.8.11-RXN] ==
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== Gene Tiso_gene_2450 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 8043
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.7.8.11 EC-2.7.8.11]
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** POSITIVE
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* right end position:
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** 8413
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* centisome position:
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** 41.448082   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ATPASE-RXN]]
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** 1 [[MYO-INOSITOL]][c] '''+''' 1 [[CDPDIACYLGLYCEROL]][c] '''=>''' 1 [[CMP]][c] '''+''' 1 [[L-1-phosphatidyl-inositols]][c] '''+''' 1 [[PROTON]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 myo-inositol[c] '''+''' 1 a CDP-diacylglycerol[c] '''=>''' 1 CMP[c] '''+''' 1 an L-1-phosphatidyl-inositol[c] '''+''' 1 H+[c]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-12195]]
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* [[Tiso_gene_6541]]
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** in-silico_annotation
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** [[pantograph]]-[[esiliculosus]]
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***ec-number
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== Pathways  ==
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* [[RXN-12196]]
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* [[PHOSLIPSYN2-PWY]], superpathway of phospholipid biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PHOSLIPSYN2-PWY PHOSLIPSYN2-PWY]
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** in-silico_annotation
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** '''8''' reactions found over '''23''' reactions in the full pathway
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***ec-number
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* [[PWY-7625]], phosphatidylinositol biosynthesis II (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7625 PWY-7625]
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* [[RXN0-5462]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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** in-silico_annotation
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* [[PWY-6351]], D-myo-inositol (1,4,5)-trisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6351 PWY-6351]
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***ec-number
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Pathways associated ==
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* [[PWY-6352]], 3-phosphoinositide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6352 PWY-6352]
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* [[PWY-7184]]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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== Reconstruction information  ==
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* [[PWY-6545]]
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* [[orthology]]:
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* [[PWY-7210]]
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=8043}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11580 11580]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=8413}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01802 R01802]
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{{#set: centisome position=41.448082    }}
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* UNIPROT:
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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** [http://www.uniprot.org/uniprot/P06197 P06197]
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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** [http://www.uniprot.org/uniprot/P70500 P70500]
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** [http://www.uniprot.org/uniprot/Q8LBA6 Q8LBA6]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-2.7.8.11}}
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{{#set: gene associated=Tiso_gene_6541}}
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{{#set: in pathway=PHOSLIPSYN2-PWY|PWY-7625|PWY-6351|PWY-6352}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 18:28, 10 January 2018

Gene Tiso_gene_2450

  • left end position:
    • 8043
  • transcription direction:
    • POSITIVE
  • right end position:
    • 8413
  • centisome position:
    • 41.448082
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4076&oldid=17923"