Difference between revisions of "Tiso gene 4648"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTCYCLOHYD-RXN HISTCYCLOHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** probable_phos...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6606 PWY-6606] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTCYCLOHYD-RXN HISTCYCLOHYD-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6606 PWY-6606] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
 
* common name:
 
* common name:
−
** probable_phosphoribosyl-amp_cyclohydrolase
+
** guanosine nucleotides degradation II
−
** phosphoribosyl-amp_cyclohydrolase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/3.5.4.19 EC-3.5.4.19]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''4''' reactions found over '''4''' reactions in the full pathway
−
** 1 [[PHOSPHORIBOSYL-AMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PHOSPHORIBOSYL-FORMIMINO-AICAR-P]][c]
+
* [[GUANINE-DEAMINASE-RXN]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 1-(5-phospho-β-D-ribosyl)-AMP[c] '''+''' 1 H2O[c] '''=>''' 1 1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide[c]
+
*** [[Tiso_gene_12280]]
−
 
+
** 2 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[annotation-in-silico_annotation]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[orthology-creinhardtii]]
−
* [[Tiso_gene_5047]]
+
* [[RXN-7609]]
−
** IN-SILICO_ANNOTATION
+
** 8 associated gene(s):
−
***AUTOMATED-NAME-MATCH
+
*** [[Tiso_gene_5911]]
−
* [[Tiso_gene_11297]]
+
*** [[Tiso_gene_13929]]
−
** IN-SILICO_ANNOTATION
+
*** [[Tiso_gene_6640]]
−
***AUTOMATED-NAME-MATCH
+
*** [[Tiso_gene_9166]]
−
** [[pantograph]]-[[athaliana]]
+
*** [[Tiso_gene_14435]]
−
** [[pantograph]]-[[synechocystis]]
+
*** [[Tiso_gene_14434]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[Tiso_gene_6988]]
−
** [[pantograph]]-[[creinhardtii]]
+
*** [[Tiso_gene_14246]]
−
== Pathways  ==
+
** 3 reconstruction source(s) associated:
−
* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
+
*** [[annotation-in-silico_annotation]]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
*** [[orthology-creinhardtii]]
−
== Reconstruction information  ==
+
*** [[orthology-esiliculosus]]
−
* Category: [[orthology]]
+
* [[RXN0-366]]
−
** Source: [[orthology-athaliana]]
+
** 2 associated gene(s):
−
*** Tool: [[pantograph]]
+
*** [[Tiso_gene_11910]]
−
** Source: [[orthology-creinhardtii]]
+
*** [[Tiso_gene_12995]]
−
*** Tool: [[pantograph]]
+
** 1 reconstruction source(s) associated:
−
** Source: [[orthology-synechocystis]]
+
*** [[annotation-in-silico_annotation]]
−
*** Tool: [[pantograph]]
+
* [[RXN0-901]]
−
** Source: [[orthology-esiliculosus]]
+
** 1 associated gene(s):
−
*** Tool: [[pantograph]]
+
*** [[Tiso_gene_11775]]
−
* Category: [[manual]]
+
** 2 reconstruction source(s) associated:
−
** Source: [[manual-primary_network]]
+
*** [[orthology-athaliana]]
−
* Category: [[annotation]]
+
*** [[annotation-in-silico_annotation]]
−
** Source: [[annotation-in-silico_annotation]]
+
== Reaction(s) not found ==
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: taxonomic range=TAX-4751}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20049 20049]
+
{{#set: taxonomic range=TAX-3193}}
−
* LIGAND-RXN:
+
{{#set: common name=guanosine nucleotides degradation II}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R04037 R04037]
+
{{#set: reaction found=4}}
−
* UNIPROT:
+
{{#set: total reaction=4}}
−
** [http://www.uniprot.org/uniprot/P44434 P44434]
+
{{#set: completion rate=100.0}}
−
** [http://www.uniprot.org/uniprot/Q9JVH6 Q9JVH6]
+
−
** [http://www.uniprot.org/uniprot/Q9X0C5 Q9X0C5]
+
−
** [http://www.uniprot.org/uniprot/Q9PM71 Q9PM71]
+
−
** [http://www.uniprot.org/uniprot/Q02130 Q02130]
+
−
** [http://www.uniprot.org/uniprot/Q9RWD6 Q9RWD6]
+
−
** [http://www.uniprot.org/uniprot/Q58825 Q58825]
+
−
** [http://www.uniprot.org/uniprot/O28329 O28329]
+
−
** [http://www.uniprot.org/uniprot/O34912 O34912]
+
−
** [http://www.uniprot.org/uniprot/P0A5B3 P0A5B3]
+
−
** [http://www.uniprot.org/uniprot/Q9HUB7 Q9HUB7]
+
−
** [http://www.uniprot.org/uniprot/Q9KSW7 Q9KSW7]
+
−
** [http://www.uniprot.org/uniprot/Q9K0H5 Q9K0H5]
+
−
** [http://www.uniprot.org/uniprot/O67780 O67780]
+
−
** [http://www.uniprot.org/uniprot/Q9PBD1 Q9PBD1]
+
−
** [http://www.uniprot.org/uniprot/Q50837 Q50837]
+
−
** [http://www.uniprot.org/uniprot/Q53158 Q53158]
+
−
** [http://www.uniprot.org/uniprot/P45353 P45353]
+
−
** [http://www.uniprot.org/uniprot/Q12670 Q12670]
+
−
** [http://www.uniprot.org/uniprot/P00815 P00815]
+
−
** [http://www.uniprot.org/uniprot/P07685 P07685]
+
−
** [http://www.uniprot.org/uniprot/O59667 O59667]
+
−
** [http://www.uniprot.org/uniprot/Q9X7C3 Q9X7C3]
+
−
** [http://www.uniprot.org/uniprot/O82768 O82768]
+
−
** [http://www.uniprot.org/uniprot/P10367 P10367]
+
−
** [http://www.uniprot.org/uniprot/P06989 P06989]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=probable_phosphoribosyl-amp_cyclohydrolase}}
+
−
{{#set: common name=phosphoribosyl-amp_cyclohydrolase}}
+
−
{{#set: ec number=EC-3.5.4.19}}
+
−
{{#set: gene associated=Tiso_gene_5047|Tiso_gene_11297}}
+
−
{{#set: in pathway=HISTSYN-PWY}}
+
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
−
{{#set: reconstruction source=orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 16:03, 21 March 2018

Pathway PWY-6606

  • taxonomic range:
  • common name:
    • guanosine nucleotides degradation II
  • Synonym(s):

Reaction(s) found

4 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4648&oldid=32058"