Difference between revisions of "Tiso gene 5008"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14240 RXN-14240] == * direction: ** LEFT-TO-RIGHT * common name: ** baicalein peroxidase ** asc...")
(Created page with "Category:Gene == Gene Tiso_gene_5008 == * right end position: ** 8090 * transcription direction: ** POSITIVE * left end position: ** 4987 * centisome position: ** 35.51994...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14240 RXN-14240] ==
+
== Gene Tiso_gene_5008 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 8090
−
* common name:
+
* transcription direction:
−
** baicalein peroxidase
+
** POSITIVE
−
** ascorbate_peroxidase
+
* left end position:
−
** ORF
+
** 4987
−
* ec number:
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/1.11.1.7 EC-1.11.1.7]
+
** 35.519943   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[1TRANSKETO-RXN]]
−
** 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-12724]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[CPD-15172]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 hydrogen peroxide[c] '''+''' 1 baicalein[c] '''=>''' 2 H2O[c] '''+''' 1 6,7-dehydrobaicalein[c]
+
** Source: [[annotation-experimental_annotation]]
−
 
+
*** Assignment: ec-number
−
== Genes associated with this reaction  ==
+
** Source: [[orthology-athaliana]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** Source: [[orthology-athaliana]]
−
* [[Tiso_gene_5857]]
+
** Source: [[orthology-synechocystis]]
−
** [[pantograph]]-[[esiliculosus]]
+
* Reaction: [[2TRANSKETO-RXN]]
−
* [[Tiso_gene_15962]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: ec-number
−
***EC-NUMBER
+
** Source: [[annotation-experimental_annotation]]
−
* [[Tiso_gene_15820]]
+
*** Assignment: ec-number
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-athaliana]]
−
***EC-NUMBER
+
** Source: [[orthology-athaliana]]
−
* [[Tiso_gene_6431]]
+
** Source: [[orthology-creinhardtii]]
−
** [[pantograph]]-[[esiliculosus]]
+
* Reaction: [[R01067]]
−
* [[Tiso_gene_20206]]
+
** Source: [[orthology-synechocystis]]
−
** [[pantograph]]-[[esiliculosus]]
+
== Pathways associated ==
−
* [[Tiso_gene_7067]]
+
* [[PWY-6901]]
−
** [[pantograph]]-[[esiliculosus]]
+
* [[P124-PWY]]
−
* [[Tiso_gene_19683]]
+
* [[CALVIN-PWY]]
−
** [[pantograph]]-[[esiliculosus]]
+
* [[P21-PWY]]
−
* [[Tiso_gene_16028]]
+
* [[PWY-5723]]
−
** [[pantograph]]-[[esiliculosus]]
+
* [[PWY-1861]]
−
* [[Tiso_gene_11016]]
+
* [[P185-PWY]]
−
** IN-SILICO_ANNOTATION
+
* [[NONOXIPENT-PWY]]
−
***EC-NUMBER
+
−
* [[Tiso_gene_9359]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_17551]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
== Pathways ==
+
−
* [[PWY-7214]], baicalein degradation (hydrogen peroxide detoxification): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7214 PWY-7214]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=8090}}
−
{{#set: common name=baicalein peroxidase}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=ascorbate_peroxidase}}
+
{{#set: left end position=4987}}
−
{{#set: common name=ORF}}
+
{{#set: centisome position=35.519943    }}
−
{{#set: ec number=EC-1.11.1.7}}
+
{{#set: reaction associated=1TRANSKETO-RXN|2TRANSKETO-RXN|R01067}}
−
{{#set: gene associated=Tiso_gene_5857|Tiso_gene_15962|Tiso_gene_15820|Tiso_gene_6431|Tiso_gene_20206|Tiso_gene_7067|Tiso_gene_19683|Tiso_gene_16028|Tiso_gene_11016|Tiso_gene_9359|Tiso_gene_17551}}
+
{{#set: pathway associated=PWY-6901|P124-PWY|CALVIN-PWY|P21-PWY|PWY-5723|PWY-1861|P185-PWY|NONOXIPENT-PWY}}
−
{{#set: in pathway=PWY-7214}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 20:16, 21 March 2018

Gene Tiso_gene_5008

  • right end position:
    • 8090
  • transcription direction:
    • POSITIVE
  • left end position:
    • 4987
  • centisome position:
    • 35.519943
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5008&oldid=40584"