Difference between revisions of "Tiso gene 5460"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11481 RXN-11481] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyacyl-[acyl-carrier...")
 
(Created page with "Category:Gene == Gene Tiso_gene_5460 == * right end position: ** 8708 * transcription direction: ** NEGATIVE * left end position: ** 2032 * centisome position: ** 15.12580...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11481 RXN-11481] ==
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== Gene Tiso_gene_5460 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 8708
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* common name:
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* transcription direction:
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** 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
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** 2032
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* centisome position:
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** 15.125801   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[13-BETA-GLUCAN-SYNTHASE-RXN]]
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** 1 [[3-hydroxypimeloyl-ACP-methyl-esters]][c] '''=>''' 1 [[Enoylpimeloyl-ACP-methyl-esters]][c] '''+''' 1 [[WATER]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 a (3R)-3-hydroxypimeloyl-[acp] methyl ester[c] '''=>''' 1 an enoylpimeloyl-[acp] methyl ester[c] '''+''' 1 H2O[c]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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* [[PWY-6773]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_6885]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_6884]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6519 PWY-6519]
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** '''9''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=8708}}
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{{#set: common name=3-hydroxyacyl-[acyl-carrier-protein] dehydratase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-4.2.1.59}}
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{{#set: left end position=2032}}
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{{#set: gene associated=Tiso_gene_6885|Tiso_gene_6884}}
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{{#set: centisome position=15.125801    }}
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{{#set: in pathway=PWY-6519}}
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{{#set: reaction associated=13-BETA-GLUCAN-SYNTHASE-RXN}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY-6773}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation}}
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Latest revision as of 20:22, 21 March 2018

Gene Tiso_gene_5460

  • right end position:
    • 8708
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 2032
  • centisome position:
    • 15.125801
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5460&oldid=41167"