Difference between revisions of "Tiso gene 5619"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=COUMARATE COUMARATE] == * smiles: ** C(=O)([O-])C=CC1(=CC=C(O)C=C1) * inchi key: ** InChIKey=NG...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.21-RXN 3.2.1.21-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** beta-glucosidase-like...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=COUMARATE COUMARATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.21-RXN 3.2.1.21-RXN] ==
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* smiles:
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* direction:
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** C(=O)([O-])C=CC1(=CC=C(O)C=C1)
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** LEFT-TO-RIGHT
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* inchi key:
+
−
** InChIKey=NGSWKAQJJWESNS-ZZXKWVIFSA-M
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* common name:
 
* common name:
−
** 4-coumarate
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** beta-glucosidase-like_chloroplastic
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* molecular weight:
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** ORF
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** 163.152   
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** low_quality_protein:_beta-glucosidase-like_chloroplastic-like
 +
** beta_glucosidase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
 
* Synonym(s):
 
* Synonym(s):
−
** 4-hydroxycinnamate
 
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** 4-hydroxycinnamic acid
 
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** p-coumarate
 
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** trans-4-hydroxycinnamate
 
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** p-coumaric acid
 
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** trans-p-hydroxycinnamate
 
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** trans-4-coumarate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[4-COUMARATE--COA-LIGASE-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[Beta-D-glucosides]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Glucopyranose]][c] '''+''' 1 [[Non-Glucosylated-Glucose-Acceptors]][c]
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* [[TRANS-CINNAMATE-4-MONOOXYGENASE-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 a β-D glucoside[c] '''+''' 1 H2O[c] '''=>''' 1 D-glucopyranose[c] '''+''' 1 a non glucosylated D-glucose acceptor[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_6497]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_8669]]
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** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_2843]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_6007]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_15066]]
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** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_13305]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_15067]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_13306]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_6188]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_6187]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_3467]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_5836]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_10001]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_2344]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* CAS : 7400-08-0
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* UNIPROT:
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/P29091 P29091]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=54708745 54708745]
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** [http://www.uniprot.org/uniprot/P29090 P29090]
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* HMDB : HMDB02035
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** [http://www.uniprot.org/uniprot/P27034 P27034]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P16084 P16084]
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** [http://www.genome.jp/dbget-bin/www_bget?C00811 C00811]
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** [http://www.uniprot.org/uniprot/Q03506 Q03506]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/Q23892 Q23892]
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** [http://www.chemspider.com/Chemical-Structure.4450678.html 4450678]
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** [http://www.uniprot.org/uniprot/Q9CFI7 Q9CFI7]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P22507 P22507]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=12876 12876]
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** [http://www.uniprot.org/uniprot/P33363 P33363]
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* METABOLIGHTS : MTBLC12876
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** [http://www.uniprot.org/uniprot/Q9WXN2 Q9WXN2]
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{{#set: smiles=C(=O)([O-])C=CC1(=CC=C(O)C=C1)}}
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** [http://www.uniprot.org/uniprot/Q9CFL0 Q9CFL0]
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{{#set: inchi key=InChIKey=NGSWKAQJJWESNS-ZZXKWVIFSA-M}}
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** [http://www.uniprot.org/uniprot/Q9CJ31 Q9CJ31]
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{{#set: common name=4-coumarate}}
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** [http://www.uniprot.org/uniprot/P12614 P12614]
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{{#set: molecular weight=163.152    }}
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** [http://www.uniprot.org/uniprot/P06835 P06835]
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{{#set: common name=4-hydroxycinnamate|4-hydroxycinnamic acid|p-coumarate|trans-4-hydroxycinnamate|p-coumaric acid|trans-p-hydroxycinnamate|trans-4-coumarate}}
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** [http://www.uniprot.org/uniprot/P26205 P26205]
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{{#set: consumed by=4-COUMARATE--COA-LIGASE-RXN}}
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** [http://www.uniprot.org/uniprot/P26204 P26204]
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{{#set: produced by=TRANS-CINNAMATE-4-MONOOXYGENASE-RXN}}
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** [http://www.uniprot.org/uniprot/P07337 P07337]
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** [http://www.uniprot.org/uniprot/Q8X8G6 Q8X8G6]
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** [http://www.uniprot.org/uniprot/Q12653 Q12653]
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** [http://www.uniprot.org/uniprot/P48825 P48825]
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** [http://www.uniprot.org/uniprot/P94248 P94248]
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** [http://www.uniprot.org/uniprot/O24749 O24749]
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** [http://www.uniprot.org/uniprot/Q9SPK3 Q9SPK3]
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** [http://www.uniprot.org/uniprot/P22073 P22073]
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** [http://www.uniprot.org/uniprot/P22505 P22505]
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** [http://www.uniprot.org/uniprot/P96316 P96316]
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** [http://www.uniprot.org/uniprot/P10482 P10482]
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** [http://www.uniprot.org/uniprot/P14002 P14002]
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** [http://www.uniprot.org/uniprot/P15885 P15885]
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** [http://www.uniprot.org/uniprot/P26208 P26208]
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** [http://www.uniprot.org/uniprot/Q41172 Q41172]
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** [http://www.uniprot.org/uniprot/Q7M0Q7 Q7M0Q7]
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** [http://www.uniprot.org/uniprot/Q08638 Q08638]
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** [http://www.uniprot.org/uniprot/Q9S9H4 Q9S9H4]
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** [http://www.uniprot.org/uniprot/Q59976 Q59976]
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** [http://www.uniprot.org/uniprot/Q59437 Q59437]
 +
** [http://www.uniprot.org/uniprot/Q42618 Q42618]
 +
** [http://www.uniprot.org/uniprot/Q42975 Q42975]
 +
** [http://www.uniprot.org/uniprot/Q40984 Q40984]
 +
** [http://www.uniprot.org/uniprot/Q43073 Q43073]
 +
** [http://www.uniprot.org/uniprot/O82074 O82074]
 +
** [http://www.uniprot.org/uniprot/O24524 O24524]
 +
** [http://www.uniprot.org/uniprot/Q8CJM3 Q8CJM3]
 +
** [http://www.uniprot.org/uniprot/Q9X9R4 Q9X9R4]
 +
** [http://www.uniprot.org/uniprot/O68843 O68843]
 +
** [http://www.uniprot.org/uniprot/O82772 O82772]
 +
** [http://www.uniprot.org/uniprot/O49117 O49117]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=beta-glucosidase-like_chloroplastic}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=low_quality_protein:_beta-glucosidase-like_chloroplastic-like}}
 +
{{#set: common name=beta_glucosidase}}
 +
{{#set: ec number=EC-3.2.1.21}}
 +
{{#set: gene associated=Tiso_gene_6497|Tiso_gene_8669|Tiso_gene_2843|Tiso_gene_6007|Tiso_gene_15066|Tiso_gene_13305|Tiso_gene_15067|Tiso_gene_13306|Tiso_gene_6188|Tiso_gene_6187|Tiso_gene_3467|Tiso_gene_5836|Tiso_gene_10001|Tiso_gene_2344}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 18:04, 10 January 2018

Reaction 3.2.1.21-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • beta-glucosidase-like_chloroplastic
    • ORF
    • low_quality_protein:_beta-glucosidase-like_chloroplastic-like
    • beta_glucosidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links








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