Difference between revisions of "Tiso gene 596"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11841 RXN-11841] == * direction: ** LEFT-TO-RIGHT * common name: ** trna_pseudouridine_synthase...")
(Created page with "Category:Gene == Gene Tiso_gene_596 == * right end position: ** 5474 * transcription direction: ** POSITIVE * left end position: ** 85 * centisome position: ** 0.27321526...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11841 RXN-11841] ==
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== Gene Tiso_gene_596 ==
* direction:
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* right end position:
** LEFT-TO-RIGHT
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** 5474
* common name:
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* transcription direction:
** trna_pseudouridine_synthase
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** POSITIVE
** trna_pseudouridinesynthase
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* left end position:
* ec number:
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** 85
** [http://enzyme.expasy.org/EC/5.4.99.27 EC-5.4.99.27]
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* centisome position:
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** 0.27321526   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* Reaction: [[2.7.1.90-RXN]]
** 1 [[tRNA-uridine13]][c] '''=>''' 1 [[tRNA-pseudouridine13]][c]
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* With common name(s):
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** 1 a uridine13 in tRNA[c] '''=>''' 1 a pseudouridine13 in tRNA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_9833]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_11913]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_4021]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_4020]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_2988]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_18959]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_19622]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[6PFRUCTPHOS-RXN]]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[PWY-1042]]
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* [[GLYCOLYSIS]]
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* [[PWY-7385]]
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* [[PWY-1861]]
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* [[ANAGLYCOLYSIS-PWY]]
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* [[PWY-5484]]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=5474}}
{{#set: common name=trna_pseudouridine_synthase}}
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{{#set: transcription direction=POSITIVE}}
{{#set: common name=trna_pseudouridinesynthase}}
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{{#set: left end position=85}}
{{#set: ec number=EC-5.4.99.27}}
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{{#set: centisome position=0.27321526    }}
{{#set: gene associated=Tiso_gene_9833|Tiso_gene_11913|Tiso_gene_4021|Tiso_gene_4020|Tiso_gene_2988|Tiso_gene_18959|Tiso_gene_19622}}
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{{#set: reaction associated=2.7.1.90-RXN|6PFRUCTPHOS-RXN}}
{{#set: in pathway=}}
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{{#set: pathway associated=PWY-1042|GLYCOLYSIS|PWY-7385|PWY-1861|ANAGLYCOLYSIS-PWY|PWY-5484}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 21:17, 21 March 2018

Gene Tiso_gene_596

  • right end position:
    • 5474
  • transcription direction:
    • POSITIVE
  • left end position:
    • 85
  • centisome position:
    • 0.27321526
  • Synonym(s):

Reactions associated

Pathways associated

External links