Difference between revisions of "Tiso gene 6069"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-SERINE D-SERINE] == * smiles: ** C(O)C([N+])C([O-])=O * inchi key: ** InChIKey=MTCFGRXMJLQNBG...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5471 RXN-5471] == * direction: ** LEFT-TO-RIGHT * common name: ** dolichyl-P-Glc:Glc1Man2GlcNAc...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-SERINE D-SERINE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5471 RXN-5471] ==
* smiles:
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* direction:
** C(O)C([N+])C([O-])=O
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** LEFT-TO-RIGHT
* inchi key:
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** InChIKey=MTCFGRXMJLQNBG-UWTATZPHSA-N
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* common name:
 
* common name:
** D-serine
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** dolichyl-P-Glc:Glc1Man2GlcNAc2-PPdolichol α-1,3-glucosyltransferase
* molecular weight:
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* ec number:
** 105.093   
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** [http://enzyme.expasy.org/EC/2.4.1.265 EC-2.4.1.265]
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
== Reaction(s) known to produce the compound ==
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* With identifiers:
* [[5.1.1.18-RXN]]
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** 1 [[CPD-5169]][c] '''+''' 1 [[CPD-166]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-5170]][c] '''+''' 1 [[DOLICHOLP]][c]
== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 a dolichyl β-D-glucosyl phosphate[c] '''=>''' 1 H+[c] '''+''' 1 α-D-Glc-(1→3)-α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 a dolichyl phosphate[c]
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== Genes associated with this reaction  ==
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== Pathways  ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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** '''19''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
* CAS : 312-84-5
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* RHEA:
* METABOLIGHTS : MTBLC35247
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31310 31310]
* PUBCHEM:
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* LIGAND-RXN:
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6857549 6857549]
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** [http://www.genome.jp/dbget-bin/www_bget?R06263 R06263]
* HMDB : HMDB03406
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{{#set: direction=LEFT-TO-RIGHT}}
* LIGAND-CPD:
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{{#set: common name=dolichyl-P-Glc:Glc1Man2GlcNAc2-PPdolichol α-1,3-glucosyltransferase}}
** [http://www.genome.jp/dbget-bin/www_bget?C00740 C00740]
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{{#set: ec number=EC-2.4.1.265}}
* CHEBI:
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=35247 35247]
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{{#set: reconstruction category=annotation}}
* BIGG : ser__D
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{{#set: reconstruction tool=pathwaytools}}
{{#set: smiles=C(O)C([N+])C([O-])=O}}
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{{#set: reconstruction source=in-silico_annotation}}
{{#set: inchi key=InChIKey=MTCFGRXMJLQNBG-UWTATZPHSA-N}}
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{{#set: common name=D-serine}}
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{{#set: molecular weight=105.093    }}
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{{#set: produced by=5.1.1.18-RXN}}
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Revision as of 17:58, 10 January 2018

Reaction RXN-5471

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • dolichyl-P-Glc:Glc1Man2GlcNAc2-PPdolichol α-1,3-glucosyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 1 a dolichyl β-D-glucosyl phosphate[c] => 1 H+[c] + 1 α-D-Glc-(1→3)-α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 1 a dolichyl phosphate[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links