Difference between revisions of "Tiso gene 6069"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PELARGONIDIN-3-GLUCOSIDE-CMPD PELARGONIDIN-3-GLUCOSIDE-CMPD] == * smiles: ** C(O)C1(C(O)C(O)C(O...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.11-RXN 3.1.4.11-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phospholipase_c_beta_...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PELARGONIDIN-3-GLUCOSIDE-CMPD PELARGONIDIN-3-GLUCOSIDE-CMPD] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.11-RXN 3.1.4.11-RXN] ==
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* smiles:
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* direction:
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** C(O)C1(C(O)C(O)C(O)C(O1)OC3(=CC4(=C([O+]=C(C2(=CC=C(O)C=C2))3)C=C(C=C([O-])4)[O-])))
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** LEFT-TO-RIGHT
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* inchi key:
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−
** InChIKey=ABVCUBUIXWJYSE-GQUPQBGVSA-M
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* common name:
 
* common name:
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** pelargonidin-3-O-β-D-glucoside
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** phospholipase_c_beta_4
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* molecular weight:
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** 1-phosphatidylinositol-_-bisphosphate_phosphodiesterase_gamma-2
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** 431.375   
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* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.4.11 EC-3.1.4.11]
 
* Synonym(s):
 
* Synonym(s):
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** callistephin
 
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** 3-(β-D-glucopyranosyloxy)-55,7-dihydroxy-2-(4-hydroxyphenyl)-1-benzopyrylium chloride
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-7828]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[INOSITOL-1-4-5-TRISPHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[DIACYLGLYCEROL]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
 +
** 1 a 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate[c] '''+''' 1 H2O[c] '''=>''' 1 D-myo-inositol (1,4,5)-trisphosphate[c] '''+''' 1 H+[c] '''+''' 1 a 1,2-diacyl-sn-glycerol[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_7561]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_12019]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_12020]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY-6367]], D-myo-inositol-5-phosphate metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6367 PWY-6367]
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** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6351]], D-myo-inositol (1,4,5)-trisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6351 PWY-6351]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7039]], phosphatidate metabolism, as a signaling molecule: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7039 PWY-7039]
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** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[LIPASYN-PWY]], phospholipases: [http://metacyc.org/META/NEW-IMAGE?object=LIPASYN-PWY LIPASYN-PWY]
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** '''2''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=102515300 102515300]
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** [http://www.genome.jp/dbget-bin/www_bget?R03435 R03435]
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* CHEBI:
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* UNIPROT:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=31967 31967]
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** [http://www.uniprot.org/uniprot/P10687 P10687]
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* METABOLIGHTS : MTBLC31967
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** [http://www.uniprot.org/uniprot/P10894 P10894]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P10686 P10686]
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** [http://www.genome.jp/dbget-bin/www_bget?C12137 C12137]
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** [http://www.uniprot.org/uniprot/P24135 P24135]
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{{#set: smiles=C(O)C1(C(O)C(O)C(O)C(O1)OC3(=CC4(=C([O+]=C(C2(=CC=C(O)C=C2))3)C=C(C=C([O-])4)[O-])))}}
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** [http://www.uniprot.org/uniprot/P19174 P19174]
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{{#set: inchi key=InChIKey=ABVCUBUIXWJYSE-GQUPQBGVSA-M}}
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** [http://www.uniprot.org/uniprot/Q00722 Q00722]
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{{#set: common name=pelargonidin-3-O-β-D-glucoside}}
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** [http://www.uniprot.org/uniprot/Q02158 Q02158]
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{{#set: molecular weight=431.375    }}
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** [http://www.uniprot.org/uniprot/P32383 P32383]
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{{#set: common name=callistephin|3-(β-D-glucopyranosyloxy)-55,7-dihydroxy-2-(4-hydroxyphenyl)-1-benzopyrylium chloride}}
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** [http://www.uniprot.org/uniprot/Q9TS13 Q9TS13]
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{{#set: consumed by=RXN-7828}}
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** [http://www.uniprot.org/uniprot/Q24284 Q24284]
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** [http://www.uniprot.org/uniprot/P51178 P51178]
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** [http://www.uniprot.org/uniprot/P10688 P10688]
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** [http://www.uniprot.org/uniprot/P10895 P10895]
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** [http://www.uniprot.org/uniprot/Q60450 Q60450]
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** [http://www.uniprot.org/uniprot/P08487 P08487]
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** [http://www.uniprot.org/uniprot/Q9STZ3 Q9STZ3]
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** [http://www.uniprot.org/uniprot/P40977 P40977]
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** [http://www.uniprot.org/uniprot/Q21754 Q21754]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=phospholipase_c_beta_4}}
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{{#set: common name=1-phosphatidylinositol-_-bisphosphate_phosphodiesterase_gamma-2}}
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{{#set: ec number=EC-3.1.4.11}}
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{{#set: gene associated=Tiso_gene_7561|Tiso_gene_12019|Tiso_gene_12020}}
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{{#set: in pathway=PWY-6367|PWY-6351|PWY-7039|LIPASYN-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:42, 21 March 2018

Reaction 3.1.4.11-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phospholipase_c_beta_4
    • 1-phosphatidylinositol-_-bisphosphate_phosphodiesterase_gamma-2
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6367, D-myo-inositol-5-phosphate metabolism: PWY-6367
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6351, D-myo-inositol (1,4,5)-trisphosphate biosynthesis: PWY-6351
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7039, phosphatidate metabolism, as a signaling molecule: PWY-7039
    • 2 reactions found over 5 reactions in the full pathway
  • LIPASYN-PWY, phospholipases: LIPASYN-PWY
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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