Difference between revisions of "Tiso gene 6187"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBOSYL-FORMIMINO-AICAR-P PHOSPHORIBOSYL-FORMIMINO-AICAR-P] == * smiles: ** C(NC1(OC(COP...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.18.1.2-RXN 1.18.1.2-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ferredoxin--nadp_embr...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBOSYL-FORMIMINO-AICAR-P PHOSPHORIBOSYL-FORMIMINO-AICAR-P] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.18.1.2-RXN 1.18.1.2-RXN] ==
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* smiles:
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* direction:
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** C(NC1(OC(COP([O-])(=O)[O-])C(O)C(O)1))=NC3(=C(C(N)=O)N=CN(C2(OC(COP([O-])(=O)[O-])C(O)C(O)2))3)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=QOUSHGMTBIIAHR-KEOHHSTQSA-J
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* common name:
 
* common name:
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** 1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide
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** ferredoxin--nadp_embryochloroplastic
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* molecular weight:
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** ferredoxin--nadp_root_isozyme_chloroplastic
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** 573.303   
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* ec number:
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** [http://enzyme.expasy.org/EC/1.18.1.2 EC-1.18.1.2]
 
* Synonym(s):
 
* Synonym(s):
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** phosphoribosylformiminoAICAR-phosphate
 
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** phosphoribosyl-formimino-aicar-P
 
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** phosphoribosylformiminoAICAR-P
 
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** 5-(5-phospho-D-ribosyl-aminoformimino)-1-(5-phosphoribosyl)-imidazole4-carboxamide
 
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** 5-(5'-phospho-D-ribosyl-aminoformimino)-1-(5-phosphoribosyl)-imidazole-4-carboxamide
 
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** N-5-phosphoribosyl-formimino-5-amino-imidazole-4-carboxamide ribonucleotide
 
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** N-(5'-phospho-D-ribosylformimino)-5-amino-1-(5''-phosphoribosyl)-4-imidazolecarboxamide
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[PRICI]]
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* With identifiers:
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* [[PRIBFAICARPISOM-RXN]]
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** 1 [[NADP]][c] '''+''' 2 [[Reduced-ferredoxins]][e] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADPH]][c] '''+''' 2 [[Oxidized-ferredoxins]][e]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[HISTCYCLOHYD-RXN]]
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** 1 NADP+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[e] '''+''' 1 H+[c] '''=>''' 1 NADPH[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[e]
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* [[PRACH]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_20055]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17170]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17381]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_20168]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_20054]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_19031]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7230]], ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7230 PWY-7230]
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** '''1''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-101]], photosynthesis light reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY-101 PWY-101]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIGAND-CPD:
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?C04896 C04896]
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** [http://www.genome.jp/dbget-bin/www_bget?R01195 R01195]
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* CHEBI:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58435 58435]
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{{#set: common name=ferredoxin--nadp_embryochloroplastic}}
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* BIGG : prfp
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{{#set: common name=ferredoxin--nadp_root_isozyme_chloroplastic}}
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* PUBCHEM:
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{{#set: ec number=EC-1.18.1.2}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266644 45266644]
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{{#set: gene associated=Tiso_gene_20055|Tiso_gene_17170|Tiso_gene_17381|Tiso_gene_20168|Tiso_gene_20054|Tiso_gene_19031}}
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* HMDB : HMDB12277
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{{#set: in pathway=PWY-7230|PWY-101}}
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{{#set: smiles=C(NC1(OC(COP([O-])(=O)[O-])C(O)C(O)1))=NC3(=C(C(N)=O)N=CN(C2(OC(COP([O-])(=O)[O-])C(O)C(O)2))3)}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: inchi key=InChIKey=QOUSHGMTBIIAHR-KEOHHSTQSA-J}}
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{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: common name=1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: molecular weight=573.303    }}
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{{#set: common name=phosphoribosylformiminoAICAR-phosphate|phosphoribosyl-formimino-aicar-P|phosphoribosylformiminoAICAR-P|5-(5-phospho-D-ribosyl-aminoformimino)-1-(5-phosphoribosyl)-imidazole4-carboxamide|5-(5'-phospho-D-ribosyl-aminoformimino)-1-(5-phosphoribosyl)-imidazole-4-carboxamide|N-5-phosphoribosyl-formimino-5-amino-imidazole-4-carboxamide ribonucleotide|N-(5'-phospho-D-ribosylformimino)-5-amino-1-(5''-phosphoribosyl)-4-imidazolecarboxamide}}
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−
{{#set: consumed by=PRICI|PRIBFAICARPISOM-RXN}}
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{{#set: produced by=HISTCYCLOHYD-RXN|PRACH}}
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Revision as of 19:00, 18 March 2018

Reaction 1.18.1.2-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ferredoxin--nadp_embryochloroplastic
    • ferredoxin--nadp_root_isozyme_chloroplastic
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7230, ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic): PWY-7230
    • 1 reactions found over 12 reactions in the full pathway
  • PWY-101, photosynthesis light reactions: PWY-101
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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