Difference between revisions of "Tiso gene 6188"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCUROISOM-RXN GLUCUROISOM-RXN] == * direction: ** REVERSIBLE * common name: ** ORF ** bh0493_prot...")
(Created page with "Category:Gene == Gene Tiso_gene_6188 == * right end position: ** 3613 * transcription direction: ** POSITIVE * left end position: ** 846 * centisome position: ** 6.792453...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCUROISOM-RXN GLUCUROISOM-RXN] ==
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== Gene Tiso_gene_6188 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 3613
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* common name:
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* transcription direction:
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** ORF
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** POSITIVE
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** bh0493_protein
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* left end position:
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* ec number:
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** 846
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** [http://enzyme.expasy.org/EC/5.3.1.12 EC-5.3.1.12]
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* centisome position:
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** 6.792453   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.2.1.21-RXN]]
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** 1 [[CPD-15530]][c] '''<=>''' 1 [[FRUCTURONATE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 aldehydo-D-glucuronate[c] '''<=>''' 1 D-fructuronate[c]
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* Reaction: [[RXN-10769]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-10773]]
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* Gene: [[Tiso_gene_8329]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-13602]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-13603]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14179]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-5341]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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* Gene: [[Tiso_gene_19097]]
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* Reaction: [[RXN-8036]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN-9674]]
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* [[PWY-7247]], &beta;-D-glucuronide and D-glucuronate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7247 PWY-7247]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-3121]]
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* [[PWY-6002]]
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* [[PWY-6788]]
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* [[PWY-5176]]
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* [[PWY-7092]]
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* [[PWY-7091]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=3613}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13049 13049]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=846}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01482 R01482]
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{{#set: centisome position=6.792453    }}
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* UNIPROT:
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{{#set: reaction associated=3.2.1.21-RXN|RXN-10769|RXN-10773|RXN-13602|RXN-13603|RXN-14179|RXN-5341|RXN-8036|RXN-9674}}
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** [http://www.uniprot.org/uniprot/P0A8G3 P0A8G3]
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{{#set: pathway associated=PWY-3121|PWY-6002|PWY-6788|PWY-5176|PWY-7092|PWY-7091}}
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** [http://www.uniprot.org/uniprot/Q9CF53 Q9CF53]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=ORF}}
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{{#set: common name=bh0493_protein}}
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{{#set: ec number=EC-5.3.1.12}}
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{{#set: gene associated=Tiso_gene_8329|Tiso_gene_19097}}
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{{#set: in pathway=PWY-7247}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 21:16, 21 March 2018

Gene Tiso_gene_6188

  • right end position:
    • 3613
  • transcription direction:
    • POSITIVE
  • left end position:
    • 846
  • centisome position:
    • 6.792453
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6188&oldid=47307"