Difference between revisions of "Tiso gene 6376"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9556 RXN-9556] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-cis-vaccenoyl-[acyl-car...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2141 RXN0-2141] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-synthase * ec num...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2141 RXN0-2141] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | + | ** 3-oxoacyl-synthase | |
| − | ** 3-oxoacyl- | + | |
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[Cis-delta-3-decenoyl-ACPs]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[b-Keto-cis-D5-dodecenoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 a (3Z)-dec-3-enoyl-[acp][c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a (5Z)-3-oxo-dodec-5-enoyl-[acp][c] '''+''' 1 CO2[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * [[Tiso_gene_5939]] |
| − | + | ||
| − | + | ||
| − | + | ||
** IN-SILICO_ANNOTATION | ** IN-SILICO_ANNOTATION | ||
***EC-NUMBER | ***EC-NUMBER | ||
** EXPERIMENTAL_ANNOTATION | ** EXPERIMENTAL_ANNOTATION | ||
***EC-NUMBER | ***EC-NUMBER | ||
| − | |||
== Pathways == | == Pathways == | ||
| − | * [[ | + | * [[PWY0-862]], (5Z)-dodec-5-enoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-862 PWY0-862] |
| − | ** ''' | + | ** '''5''' reactions found over '''6''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[ | + | * Category: [[annotation]] |
| − | ** [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | *** | + | *** Tool: [[pathwaytools]] |
| − | + | ** Source: [[annotation-experimental_annotation]] | |
| − | + | *** Tool: [[pathwaytools]] | |
| − | ** | + | |
| − | *** [[ | + | |
== External links == | == External links == | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | + | {{#set: common name=3-oxoacyl-synthase}} | |
| − | {{#set: common name=3-oxoacyl- | + | {{#set: ec number=EC-2.3.1.41}} |
| − | {{#set: ec number=EC- | + | {{#set: gene associated=Tiso_gene_5939}} |
| − | {{#set: gene associated= | + | {{#set: in pathway=PWY0-862}} |
| − | {{#set: in pathway= | + | |
| − | + | ||
| − | + | ||
| − | + | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
| − | |||
Revision as of 01:06, 19 March 2018
Contents
Reaction RXN0-2141
- direction:
- LEFT-TO-RIGHT
- common name:
- 3-oxoacyl-synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PROTON[c] + 1 MALONYL-ACP[c] + 1 Cis-delta-3-decenoyl-ACPs[c] => 1 ACP[c] + 1 b-Keto-cis-D5-dodecenoyl-ACPs[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 H+[c] + 1 a malonyl-[acp][c] + 1 a (3Z)-dec-3-enoyl-[acp][c] => 1 a holo-[acyl-carrier protein][c] + 1 a (5Z)-3-oxo-dodec-5-enoyl-[acp][c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_5939
- IN-SILICO_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
Pathways
- PWY0-862, (5Z)-dodec-5-enoate biosynthesis: PWY0-862
- 5 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
