Difference between revisions of "Tiso gene 65"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LINOLEOYL-RXN LINOLEOYL-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
(Created page with "Category:Gene == Gene Tiso_gene_65 == * right end position: ** 42238 * transcription direction: ** POSITIVE * left end position: ** 41134 * centisome position: ** 78.07683...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LINOLEOYL-RXN LINOLEOYL-RXN] ==
+
== Gene Tiso_gene_65 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 42238
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/3.1.2 EC-3.1.2]
+
** POSITIVE
 +
* left end position:
 +
** 41134
 +
* centisome position:
 +
** 78.076836   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[F16ALDOLASE-RXN]]
−
** 1 [[WATER]][c] '''+''' 1 [[CPD-18]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[LINOLEIC_ACID]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 H2O[c] '''+''' 1 linoleoyl-CoA[c] '''=>''' 1 H+[c] '''+''' 1 coenzyme A[c] '''+''' 1 linoleate[c]
+
** Source: [[annotation-experimental_annotation]]
−
 
+
*** Assignment: ec-number
−
== Genes associated with this reaction  ==
+
** Source: [[orthology-esiliculosus]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** Source: [[orthology-creinhardtii]]
−
* [[Tiso_gene_801]]
+
* Reaction: [[FPGPL]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[orthology-creinhardtii]]
−
* [[Tiso_gene_7477]]
+
* Reaction: [[RXN-8631]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
== Pathways  ==
+
*** Assignment: ec-number
−
* [[PWY-6917]], vernolate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6917 PWY-6917]
+
** Source: [[annotation-experimental_annotation]]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
*** Assignment: ec-number
−
== Reconstruction information  ==
+
** Source: [[orthology-esiliculosus]]
−
* [[orthology]]:
+
* Reaction: [[SEDOBISALDOL-RXN]]
−
** [[pantograph]]:
+
** Source: [[orthology-athaliana]]
−
*** [[creinhardtii]]
+
** Source: [[orthology-athaliana]]
−
*** [[athaliana]]
+
** Source: [[orthology-creinhardtii]]
 +
== Pathways associated ==
 +
* [[PWY-1042]]
 +
* [[P341-PWY]]
 +
* [[PWY66-399]]
 +
* [[PWY66-373]]
 +
* [[SUCSYN-PWY]]
 +
* [[GLYCOLYSIS]]
 +
* [[PWY-7385]]
 +
* [[ANAGLYCOLYSIS-PWY]]
 +
* [[CALVIN-PWY]]
 +
* [[PWY0-1517]]
 +
* [[PWY-1861]]
 +
* [[PWY-6142]]
 +
* [[PWY-5484]]
 +
* [[P185-PWY]]
 +
* [[GLUCONEO-PWY]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: right end position=42238}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R08177 R08177]
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=41134}}
−
{{#set: ec number=EC-3.1.2}}
+
{{#set: centisome position=78.076836    }}
−
{{#set: gene associated=Tiso_gene_801|Tiso_gene_7477}}
+
{{#set: reaction associated=F16ALDOLASE-RXN|FPGPL|RXN-8631|SEDOBISALDOL-RXN}}
−
{{#set: in pathway=PWY-6917}}
+
{{#set: pathway associated=PWY-1042|P341-PWY|PWY66-399|PWY66-373|SUCSYN-PWY|GLYCOLYSIS|PWY-7385|ANAGLYCOLYSIS-PWY|CALVIN-PWY|PWY0-1517|PWY-1861|PWY-6142|PWY-5484|P185-PWY|GLUCONEO-PWY}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|athaliana}}
+

Latest revision as of 20:54, 21 March 2018

Gene Tiso_gene_65

  • right end position:
    • 42238
  • transcription direction:
    • POSITIVE
  • left end position:
    • 41134
  • centisome position:
    • 78.076836
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_65&oldid=44563"