Difference between revisions of "Tiso gene 6635"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNI-2 RXNI-2] == * direction: ** REVERSIBLE * common name: ** succinyl-_:3-ketoacid-coenzyme_a_tra...")
(Created page with "Category:Gene == Gene Tiso_gene_6635 == * right end position: ** 8209 * transcription direction: ** POSITIVE * left end position: ** 5636 * centisome position: ** 47.07651...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNI-2 RXNI-2] ==
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== Gene Tiso_gene_6635 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 8209
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* common name:
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* transcription direction:
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** succinyl-_:3-ketoacid-coenzyme_a_transferase_mitochondrial
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.8.3.5 EC-2.8.3.5]
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** 5636
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* centisome position:
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** 47.07651   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[UDPNACETYLMURAMATEDEHYDROG-RXN]]
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** 1 [[3-KETOBUTYRATE]][c] '''+''' 1 [[SUC-COA]][c] '''<=>''' 1 [[SUC]][c] '''+''' 1 [[ACETOACETYL-COA]][c]
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* With common name(s):
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** 1 acetoacetate[c] '''+''' 1 succinyl-CoA[c] '''<=>''' 1 succinate[c] '''+''' 1 acetoacetyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_6754]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[REDCITCYC]], TCA cycle VIII (helicobacter): [http://metacyc.org/META/NEW-IMAGE?object=REDCITCYC REDCITCYC]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[PWY66-368]], ketolysis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-368 PWY66-368]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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== Pathways associated ==
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*** Tool: [[pathwaytools]]
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* [[PWY-6386]]
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* [[PWY-6387]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=8209}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25480 25480]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=5636}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00410 R00410]
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{{#set: centisome position=47.07651    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction associated=UDPNACETYLMURAMATEDEHYDROG-RXN}}
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{{#set: common name=succinyl-_:3-ketoacid-coenzyme_a_transferase_mitochondrial}}
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{{#set: pathway associated=PWY-6386|PWY-6387}}
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{{#set: ec number=EC-2.8.3.5}}
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{{#set: gene associated=Tiso_gene_6754}}
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{{#set: in pathway=REDCITCYC|PWY66-368}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 21:23, 21 March 2018

Gene Tiso_gene_6635

  • right end position:
    • 8209
  • transcription direction:
    • POSITIVE
  • left end position:
    • 5636
  • centisome position:
    • 47.07651
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6635&oldid=48300"