Difference between revisions of "Tiso gene 7014"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R524-RXN R524-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** cyanate_hydratase * ec number...")
(Created page with "Category:Gene == Gene Tiso_gene_7014 == * right end position: ** 11588 * transcription direction: ** NEGATIVE * left end position: ** 7128 * centisome position: ** 61.3425...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R524-RXN R524-RXN] ==
+
== Gene Tiso_gene_7014 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 11588
−
* common name:
+
* transcription direction:
−
** cyanate_hydratase
+
** NEGATIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/4.2.1.104 EC-4.2.1.104]
+
** 7128
 +
* centisome position:
 +
** 61.342514   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[IDP]]
−
** 1 [[CPD-69]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CARBAMATE]][c]
+
** Source: [[orthology-creinhardtii]]
−
* With common name(s):
+
* Reaction: [[INORGPYROPHOSPHAT-RXN]]
−
** 1 cyanate[c] '''+''' 1 hydrogencarbonate[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 carbamate[c]
+
** Source: [[annotation-experimental_annotation]]
−
 
+
*** Assignment: ec-number
−
== Genes associated with this reaction  ==
+
** Source: [[orthology-athaliana]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_15128]]
+
** Source: [[orthology-creinhardtii]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-creinhardtii]]
−
***AUTOMATED-NAME-MATCH
+
== Pathways associated ==
−
** EXPERIMENTAL_ANNOTATION
+
* [[PWY-7805]]
−
***AUTOMATED-NAME-MATCH
+
* [[PWY-7807]]
−
** [[pantograph]]-[[athaliana]]
+
−
== Pathways  ==
+
−
* [[CYANCAT-PWY]], cyanate degradation: [http://metacyc.org/META/NEW-IMAGE?object=CYANCAT-PWY CYANCAT-PWY]
+
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[athaliana]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=11588}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18489 18489]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=7128}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03546 R03546]
+
{{#set: centisome position=61.342514    }}
−
* UNIPROT:
+
{{#set: reaction associated=IDP|INORGPYROPHOSPHAT-RXN}}
−
** [http://www.uniprot.org/uniprot/P00816 P00816]
+
{{#set: pathway associated=PWY-7805|PWY-7807}}
−
** [http://www.uniprot.org/uniprot/Q55367 Q55367]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=cyanate_hydratase}}
+
−
{{#set: ec number=EC-4.2.1.104}}
+
−
{{#set: gene associated=Tiso_gene_15128}}
+
−
{{#set: in pathway=CYANCAT-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=athaliana}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 21:10, 21 March 2018

Gene Tiso_gene_7014

  • right end position:
    • 11588
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 7128
  • centisome position:
    • 61.342514
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7014&oldid=46531"