Difference between revisions of "Tiso gene 743"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUC1PURIDYLTRANS-RXN GLUC1PURIDYLTRANS-RXN] == * direction: ** REVERSIBLE * common name: ** utp--g...")
 
(Created page with "Category:Gene == Gene Tiso_gene_743 == * right end position: ** 23716 * transcription direction: ** NEGATIVE * left end position: ** 18842 * centisome position: ** 65.0621...")
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUC1PURIDYLTRANS-RXN GLUC1PURIDYLTRANS-RXN] ==
+
== Gene Tiso_gene_743 ==
−
* direction:
+
* right end position:
−
** REVERSIBLE
+
** 23716
−
* common name:
+
* transcription direction:
−
** utp--glucose-1-phosphate_uridylyltransferase
+
** NEGATIVE
−
** dp-n-acetylglucosamine_pyrophosphorylase
+
* left end position:
−
** f-box_lrr-repeat_protein_13-like
+
** 18842
−
* ec number:
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/2.7.7.64 EC-2.7.7.64]
+
** 65.06216   
−
** [http://enzyme.expasy.org/EC/2.7.7.9 EC-2.7.7.9]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[ADENYLOSUCCINATE-SYNTHASE-RXN]]
−
** 1 [[GLC-1-P]][c] '''+''' 1 [[UTP]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[CPD-12575]][c] '''+''' 1 [[PPI]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 &alpha;-D-glucopyranose 1-phosphate[c] '''+''' 1 UTP[c] '''+''' 1 H+[c] '''<=>''' 1 UDP-&alpha;-D-glucose[c] '''+''' 1 diphosphate[c]
+
** Source: [[orthology-synechocystis]]
−
 
+
** Source: [[orthology-esiliculosus]]
−
== Genes associated with this reaction  ==
+
** Source: [[orthology-creinhardtii]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** Source: [[orthology-creinhardtii]]
−
* [[Tiso_gene_14796]]
+
== Pathways associated ==
−
** IN-SILICO_ANNOTATION
+
* [[PWY-7219]]
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_4816]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_6457]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_11401]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_17531]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_6458]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_6459]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_13477]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_5879]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_16930]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_17566]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_7102]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_9110]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_7440]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
== Pathways ==
+
−
* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817]
+
−
** '''7''' reactions found over '''16''' reactions in the full pathway
+
−
* [[PWY-7343]], UDP-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7343 PWY-7343]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527]
+
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-7238]], sucrose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238]
+
−
** '''6''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY-3801]], sucrose degradation II (sucrose synthase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3801 PWY-3801]
+
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[athaliana]]
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=23716}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19889 19889]
+
{{#set: transcription direction=NEGATIVE}}
−
* PIR:
+
{{#set: left end position=18842}}
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A40650 A40650]
+
{{#set: centisome position=65.06216    }}
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A41382 A41382]
+
{{#set: reaction associated=ADENYLOSUCCINATE-SYNTHASE-RXN}}
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A56146 A56146]
+
{{#set: pathway associated=PWY-7219}}
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A64250 A64250]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A64970 A64970]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A75096 A75096]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D49349 D49349]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D69184 D69184]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D70601 D70601]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E64466 E64466]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E71913 E71913]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F59102 F59102]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F64600 F64600]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F81300 F81300]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G64095 G64095]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G70125 G70125]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H70446 H70446]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC2265 JC2265]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4785 JC4785]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4985 JC4985]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0277 JX0277]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S15298 S15298]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S30007 S30007]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S31431 S31431]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S35692 S35692]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41533 S41533]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S62599 S62599]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S73501 S73501]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S78541 S78541]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T42521 T42521]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T44841 T44841]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T45453 T45453]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XNDOU XNDOU]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XNPOU XNPOU]
+
−
* LIGAND-RXN:
+
−
** [http://www.genome.jp/dbget-bin/www_bget?R00289 R00289]
+
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/Q05852 Q05852]
+
−
** [http://www.uniprot.org/uniprot/P27897 P27897]
+
−
** [http://www.uniprot.org/uniprot/Q48447 Q48447]
+
−
** [http://www.uniprot.org/uniprot/P47691 P47691]
+
−
** [http://www.uniprot.org/uniprot/P0AAB6 P0AAB6]
+
−
** [http://www.uniprot.org/uniprot/Q9UZI7 Q9UZI7]
+
−
** [http://www.uniprot.org/uniprot/P33696 P33696]
+
−
** [http://www.uniprot.org/uniprot/O26731 O26731]
+
−
** [http://www.uniprot.org/uniprot/O05576 O05576]
+
−
** [http://www.uniprot.org/uniprot/Q58730 Q58730]
+
−
** [http://www.uniprot.org/uniprot/Q9ZLI8 Q9ZLI8]
+
−
** [http://www.uniprot.org/uniprot/Q9X364 Q9X364]
+
−
** [http://www.uniprot.org/uniprot/O25363 O25363]
+
−
** [http://www.uniprot.org/uniprot/Q9PMD3 Q9PMD3]
+
−
** [http://www.uniprot.org/uniprot/P44878 P44878]
+
−
** [http://www.uniprot.org/uniprot/O51225 O51225]
+
−
** [http://www.uniprot.org/uniprot/O67602 O67602]
+
−
** [http://www.uniprot.org/uniprot/P0AEP3 P0AEP3]
+
−
** [http://www.uniprot.org/uniprot/Q43772 Q43772]
+
−
** [http://www.uniprot.org/uniprot/P74969 P74969]
+
−
** [http://www.uniprot.org/uniprot/Q07130 Q07130]
+
−
** [http://www.uniprot.org/uniprot/P32861 P32861]
+
−
** [http://www.uniprot.org/uniprot/P19595 P19595]
+
−
** [http://www.uniprot.org/uniprot/Q07131 Q07131]
+
−
** [http://www.uniprot.org/uniprot/P37776 P37776]
+
−
** [http://www.uniprot.org/uniprot/P75124 P75124]
+
−
** [http://www.uniprot.org/uniprot/Q46768 Q46768]
+
−
** [http://www.uniprot.org/uniprot/P78811 P78811]
+
−
** [http://www.uniprot.org/uniprot/Q9RMC3 Q9RMC3]
+
−
** [http://www.uniprot.org/uniprot/Q9Z5G1 Q9Z5G1]
+
−
** [http://www.uniprot.org/uniprot/P08800 P08800]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=utp--glucose-1-phosphate_uridylyltransferase}}
+
−
{{#set: common name=dp-n-acetylglucosamine_pyrophosphorylase}}
+
−
{{#set: common name=f-box_lrr-repeat_protein_13-like}}
+
−
{{#set: ec number=EC-2.7.7.64}}
+
−
{{#set: ec number=EC-2.7.7.9}}
+
−
{{#set: gene associated=Tiso_gene_14796|Tiso_gene_4816|Tiso_gene_6457|Tiso_gene_11401|Tiso_gene_17531|Tiso_gene_6458|Tiso_gene_6459|Tiso_gene_13477|Tiso_gene_5879|Tiso_gene_16930|Tiso_gene_17566|Tiso_gene_7102|Tiso_gene_9110|Tiso_gene_7440}}
+
−
{{#set: in pathway=PWY-7817|PWY-7343|PWY-6527|PWY-7238|PWY-3801}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=athaliana|esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 20:17, 21 March 2018

Gene Tiso_gene_743

  • right end position:
    • 23716
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 18842
  • centisome position:
    • 65.06216
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_743&oldid=40701"