Difference between revisions of "Tiso gene 7487"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.21.92-RXN 3.4.21.92-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ATP-dependent Clp p...")
(Created page with "Category:Gene == Gene Tiso_gene_7487 == * right end position: ** 3280 * transcription direction: ** POSITIVE * left end position: ** 5 * centisome position: ** 4.502881800...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.21.92-RXN 3.4.21.92-RXN] ==
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== Gene Tiso_gene_7487 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3280
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* common name:
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* transcription direction:
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** ATP-dependent Clp protease proteolytic subunit
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/3.4.21.92 EC-3.4.21.92]
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** 5
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* centisome position:
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** 4.502881800e-2
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.7.1.68-RXN]]
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** 1 [[General-Protein-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Peptides-holder]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 a protein[c] '''+''' 1 H2O[c] '''=>''' 1 a peptide[c]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-6352]]
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* [[Tiso_gene_10324]]
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* [[PWY-6351]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10005]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_11705]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_999]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: right end position=3280}}
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** [http://www.uniprot.org/uniprot/P12208 P12208]
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{{#set: transcription direction=POSITIVE}}
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** [http://www.uniprot.org/uniprot/Q9JU33 Q9JU33]
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{{#set: left end position=5}}
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** [http://www.uniprot.org/uniprot/Q9PE41 Q9PE41]
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{{#set: centisome position=4.502881800e-2}}
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** [http://www.uniprot.org/uniprot/P0A6G7 P0A6G7]
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{{#set: reaction associated=2.7.1.68-RXN}}
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** [http://www.uniprot.org/uniprot/P56156 P56156]
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{{#set: pathway associated=PWY-6352|PWY-6351}}
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** [http://www.uniprot.org/uniprot/P80244 P80244]
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** [http://www.uniprot.org/uniprot/O51556 O51556]
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** [http://www.uniprot.org/uniprot/O67357 O67357]
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** [http://www.uniprot.org/uniprot/O83520 O83520]
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** [http://www.uniprot.org/uniprot/Q9HYR9 Q9HYR9]
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** [http://www.uniprot.org/uniprot/P63783 P63783]
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** [http://www.uniprot.org/uniprot/O84712 O84712]
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** [http://www.uniprot.org/uniprot/P43867 P43867]
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** [http://www.uniprot.org/uniprot/O51698 O51698]
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** [http://www.uniprot.org/uniprot/P0A526 P0A526]
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** [http://www.uniprot.org/uniprot/Q9PLM0 Q9PLM0]
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** [http://www.uniprot.org/uniprot/Q9K709 Q9K709]
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** [http://www.uniprot.org/uniprot/Q9WZF9 Q9WZF9]
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** [http://www.uniprot.org/uniprot/Q9RSZ7 Q9RSZ7]
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** [http://www.uniprot.org/uniprot/Q9I2U1 Q9I2U1]
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** [http://www.uniprot.org/uniprot/Q9K888 Q9K888]
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** [http://www.uniprot.org/uniprot/P38002 P38002]
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** [http://www.uniprot.org/uniprot/Q9Z759 Q9Z759]
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** [http://www.uniprot.org/uniprot/Q9Z832 Q9Z832]
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** [http://www.uniprot.org/uniprot/P54413 P54413]
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** [http://www.uniprot.org/uniprot/Q9KQS6 Q9KQS6]
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** [http://www.uniprot.org/uniprot/Q9ZD29 Q9ZD29]
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** [http://www.uniprot.org/uniprot/Q9ZL50 Q9ZL50]
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** [http://www.uniprot.org/uniprot/P12209 P12209]
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** [http://www.uniprot.org/uniprot/Q7M2F6 Q7M2F6]
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** [http://www.uniprot.org/uniprot/P24064 P24064]
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** [http://www.uniprot.org/uniprot/P36387 P36387]
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** [http://www.uniprot.org/uniprot/P26567 P26567]
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** [http://www.uniprot.org/uniprot/P48883 P48883]
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** [http://www.uniprot.org/uniprot/Q16740 Q16740]
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** [http://www.uniprot.org/uniprot/P54416 P54416]
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** [http://www.uniprot.org/uniprot/Q59993 Q59993]
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** [http://www.uniprot.org/uniprot/P74467 P74467]
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** [http://www.uniprot.org/uniprot/P30063 P30063]
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** [http://www.uniprot.org/uniprot/Q36863 Q36863]
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** [http://www.uniprot.org/uniprot/Q42886 Q42886]
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** [http://www.uniprot.org/uniprot/P56317 P56317]
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** [http://www.uniprot.org/uniprot/P41609 P41609]
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** [http://www.uniprot.org/uniprot/Q9X7R9 Q9X7R9]
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** [http://www.uniprot.org/uniprot/O48931 O48931]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ATP-dependent Clp protease proteolytic subunit}}
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{{#set: ec number=EC-3.4.21.92}}
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{{#set: gene associated=Tiso_gene_10324|Tiso_gene_10005|Tiso_gene_11705|Tiso_gene_999}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 21:24, 21 March 2018

Gene Tiso_gene_7487

  • right end position:
    • 3280
  • transcription direction:
    • POSITIVE
  • left end position:
    • 5
  • centisome position:
    • 4.502881800e-2
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7487&oldid=48526"