Difference between revisions of "Tiso gene 7948"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2301 RXN0-2301] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_7948 == * right end position: ** 8322 * transcription direction: ** POSITIVE * left end position: ** 7283 * centisome position: ** 68.23122...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2301 RXN0-2301] ==
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== Gene Tiso_gene_7948 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 8322
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.3.8.4 EC-1.3.8.4]
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** POSITIVE
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* left end position:
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** 7283
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* centisome position:
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** 68.23122   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[CYTOCHROME-C-OXIDASE-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[ISOVALERYL-COA]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[3-METHYL-CROTONYL-COA]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H+[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 isovaleryl-CoA[c] '''=>''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 3-methylcrotonyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_18542]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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* Reaction: [[RXN-15830]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6692]]
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* [[PWY-7279]]
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* [[PWY-3781]]
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* [[PWY-4521]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=8322}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12276 12276]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=7283}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04096 R04096]
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{{#set: centisome position=68.23122    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=CYTOCHROME-C-OXIDASE-RXN|RXN-15830}}
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{{#set: ec number=EC-1.3.8.4}}
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{{#set: pathway associated=PWY-6692|PWY-7279|PWY-3781|PWY-4521}}
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{{#set: gene associated=Tiso_gene_18542}}
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{{#set: in pathway=LEU-DEG2-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 21:23, 21 March 2018

Gene Tiso_gene_7948

  • right end position:
    • 8322
  • transcription direction:
    • POSITIVE
  • left end position:
    • 7283
  • centisome position:
    • 68.23122
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7948&oldid=48324"