Difference between revisions of "Tiso gene 8389"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMYLTHFGLUSYNTH-RXN FORMYLTHFGLUSYNTH-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** bif...")
(Created page with "Category:Gene == Gene Tiso_gene_8389 == * right end position: ** 8885 * transcription direction: ** NEGATIVE * left end position: ** 5812 * centisome position: ** 56.43814...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMYLTHFGLUSYNTH-RXN FORMYLTHFGLUSYNTH-RXN] ==
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== Gene Tiso_gene_8389 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 8885
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* common name:
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* transcription direction:
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** bifunctional_protein
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** NEGATIVE
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** folylpolyglutamate_synthase
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* left end position:
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* ec number:
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** 5812
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** [http://enzyme.expasy.org/EC/6.3.2.17 EC-6.3.2.17]
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* centisome position:
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** 56.43814   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GSHTRAN-RXN]]
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** 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[FORMYL-THF-GLU-N]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 an N10-formyl-tetrahydrofolate[c] '''+''' 1 L-glutamate[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 1 an N10-formyl-tetrahydrofolate[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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* Reaction: [[GST-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_92]]
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*** Assignment: ec-number
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** IN-SILICO_ANNOTATION
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** Source: [[annotation-experimental_annotation]]
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***EC-NUMBER
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*** Assignment: ec-number
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** [[pantograph]]-[[esiliculosus]]
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* Reaction: [[RXN-13673]]
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* [[Tiso_gene_15942]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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== Pathways  ==
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*** Assignment: ec-number
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* [[PWY-2161]], folate polyglutamylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2161 PWY-2161]
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* Reaction: [[RXN-15680]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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** Source: [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** Assignment: ec-number
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* [[orthology]]:
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** Source: [[annotation-experimental_annotation]]
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** [[pantograph]]:
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*** Assignment: ec-number
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*** [[esiliculosus]]
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== Pathways associated ==
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* [[annotation]]:
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* [[PWY-7112]]
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** [[pathwaytools]]:
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* [[PWY-6842]]
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*** [[in-silico_annotation]]
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* [[PWY-4061]]
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* [[PWY-7533]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=8885}}
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{{#set: common name=bifunctional_protein}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=folylpolyglutamate_synthase}}
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{{#set: left end position=5812}}
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{{#set: ec number=EC-6.3.2.17}}
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{{#set: centisome position=56.43814    }}
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{{#set: gene associated=Tiso_gene_92|Tiso_gene_15942}}
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{{#set: reaction associated=GSHTRAN-RXN|GST-RXN|RXN-13673|RXN-15680}}
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{{#set: in pathway=PWY-2161}}
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{{#set: pathway associated=PWY-7112|PWY-6842|PWY-4061|PWY-7533}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 21:04, 21 March 2018

Gene Tiso_gene_8389

  • right end position:
    • 8885
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 5812
  • centisome position:
    • 56.43814
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8389&oldid=45638"