Difference between revisions of "Tiso gene 8411"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=DARABCAT-PWY DARABCAT-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 T...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOLACTOSE-RXN KETOLACTOSE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glycoside_hydro...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=DARABCAT-PWY DARABCAT-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOLACTOSE-RXN KETOLACTOSE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** D-arabinose degradation II
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** glycoside_hydrolase
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** polyprotein
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* ec number:
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** [http://enzyme.expasy.org/EC/3.2.1.23 EC-3.2.1.23]
 
* Synonym(s):
 
* Synonym(s):
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** D-arabinose catabolism
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''2''' reactions in the full pathway
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* With identifiers:
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* [[D-RIBULOKIN-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[3-KETOLACTOSE]][c] '''=>''' 1 [[Glucopyranose]][c] '''+''' 1 [[CPD-1242]][c]
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** 0 associated gene:
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* With common name(s):
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** 1 reconstruction source(s) associated:
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** 1 H2O[c] '''+''' 1 3'-ketolactose[c] '''=>''' 1 D-glucopyranose[c] '''+''' 1 3-keto-β-D-galactose[c]
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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== Genes associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=DARABISOM-RXN DARABISOM-RXN]
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_17558]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_1398]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_12839]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
 +
* [[LACTOSEUTIL-PWY]], lactose degradation II: [http://metacyc.org/META/NEW-IMAGE?object=LACTOSEUTIL-PWY LACTOSEUTIL-PWY]
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** '''1''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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* RHEA:
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{{#set: common name=D-arabinose degradation II}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33787 33787]
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{{#set: common name=D-arabinose catabolism}}
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* LIGAND-RXN:
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{{#set: reaction found=1}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04783 R04783]
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{{#set: total reaction=2}}
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* UNIPROT:
−
{{#set: completion rate=50.0}}
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** [http://www.uniprot.org/uniprot/P06219 P06219]
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** [http://www.uniprot.org/uniprot/P11175 P11175]
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** [http://www.uniprot.org/uniprot/P19668 P19668]
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** [http://www.uniprot.org/uniprot/P20043 P20043]
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** [http://www.uniprot.org/uniprot/P16278 P16278]
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** [http://www.uniprot.org/uniprot/P23780 P23780]
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** [http://www.uniprot.org/uniprot/P24131 P24131]
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** [http://www.uniprot.org/uniprot/Q02603 Q02603]
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** [http://www.uniprot.org/uniprot/Q53790 Q53790]
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** [http://www.uniprot.org/uniprot/P23989 P23989]
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** [http://www.uniprot.org/uniprot/P48982 P48982]
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** [http://www.uniprot.org/uniprot/Q9UYG5 Q9UYG5]
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** [http://www.uniprot.org/uniprot/Q02604 Q02604]
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** [http://www.uniprot.org/uniprot/P0AC73 P0AC73]
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** [http://www.uniprot.org/uniprot/O58247 O58247]
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** [http://www.uniprot.org/uniprot/Q9UYH2 Q9UYH2]
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** [http://www.uniprot.org/uniprot/P00722 P00722]
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** [http://www.uniprot.org/uniprot/P06864 P06864]
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** [http://www.uniprot.org/uniprot/Q47170 Q47170]
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** [http://www.uniprot.org/uniprot/Q59140 Q59140]
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** [http://www.uniprot.org/uniprot/P00723 P00723]
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** [http://www.uniprot.org/uniprot/P94248 P94248]
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** [http://www.uniprot.org/uniprot/O31341 O31341]
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** [http://www.uniprot.org/uniprot/P22498 P22498]
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** [http://www.uniprot.org/uniprot/Q02401 Q02401]
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** [http://www.uniprot.org/uniprot/P26257 P26257]
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** [http://www.uniprot.org/uniprot/Q59422 Q59422]
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** [http://www.uniprot.org/uniprot/P30812 P30812]
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** [http://www.uniprot.org/uniprot/Q12660 Q12660]
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** [http://www.uniprot.org/uniprot/P45582 P45582]
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** [http://www.uniprot.org/uniprot/P49676 P49676]
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** [http://www.uniprot.org/uniprot/Q9SCV3 Q9SCV3]
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** [http://www.uniprot.org/uniprot/Q9SZI5 Q9SZI5]
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** [http://www.uniprot.org/uniprot/O81100 O81100]
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** [http://www.uniprot.org/uniprot/Q42150 Q42150]
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** [http://www.uniprot.org/uniprot/P48980 P48980]
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** [http://www.uniprot.org/uniprot/P48981 P48981]
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** [http://www.uniprot.org/uniprot/O86616 O86616]
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** [http://www.uniprot.org/uniprot/P70753 P70753]
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** [http://www.uniprot.org/uniprot/P29853 P29853]
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** [http://www.uniprot.org/uniprot/P94804 P94804]
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{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=glycoside_hydrolase}}
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{{#set: common name=polyprotein}}
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{{#set: ec number=EC-3.2.1.23}}
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{{#set: gene associated=Tiso_gene_17558|Tiso_gene_1398|Tiso_gene_12839}}
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{{#set: in pathway=LACTOSEUTIL-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:44, 21 March 2018

Reaction KETOLACTOSE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glycoside_hydrolase
    • polyprotein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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