Difference between revisions of "Tiso gene 8669"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4366 RXNQT-4366] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** para-nitrobenzyl_e...")
(Created page with "Category:Gene == Gene Tiso_gene_8669 == * right end position: ** 8938 * transcription direction: ** POSITIVE * left end position: ** 6109 * centisome position: ** 61.09610...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4366 RXNQT-4366] ==
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== Gene Tiso_gene_8669 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 8938
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* common name:
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* transcription direction:
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** ORF
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** POSITIVE
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** para-nitrobenzyl_esterase
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* left end position:
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** alpha_beta_hydrolase_fold_protein
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** 6109
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** alpha_beta_hydrolase
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* centisome position:
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** sialate_o-acetylesterase-like_protein
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** 61.096107   
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** serine_esterase
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** lysophospholipase
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** protein_chloroplastic
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.2.1.21-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD-6442]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[METOH]][c] '''+''' 1 [[CPD-110]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 methylsalicylate[c] '''=>''' 1 H+[c] '''+''' 1 methanol[c] '''+''' 1 salicylate[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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* Reaction: [[RXN-10769]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_1922]]
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*** Assignment: ec-number
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** IN-SILICO_ANNOTATION
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** Source: [[annotation-experimental_annotation]]
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***EC-NUMBER
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*** Assignment: ec-number
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* [[Tiso_gene_12686]]
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* Reaction: [[RXN-10773]]
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** IN-SILICO_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** Assignment: ec-number
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* [[Tiso_gene_10066]]
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** Source: [[annotation-experimental_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[RXN-13602]]
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* [[Tiso_gene_4606]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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* [[Tiso_gene_9429]]
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*** Assignment: ec-number
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** IN-SILICO_ANNOTATION
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* Reaction: [[RXN-13603]]
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***EC-NUMBER
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_11351]]
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*** Assignment: ec-number
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** EXPERIMENTAL_ANNOTATION
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** Source: [[annotation-experimental_annotation]]
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***AUTOMATED-NAME-MATCH
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*** Assignment: ec-number
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* [[Tiso_gene_19778]]
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* Reaction: [[RXN-14179]]
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** IN-SILICO_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** Assignment: ec-number
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* [[Tiso_gene_4650]]
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** Source: [[annotation-experimental_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[RXN-5341]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_17029]]
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*** Assignment: ec-number
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** IN-SILICO_ANNOTATION
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** Source: [[annotation-experimental_annotation]]
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***EC-NUMBER
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*** Assignment: ec-number
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* [[Tiso_gene_16518]]
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* Reaction: [[RXN-8036]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_2556]]
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*** Assignment: ec-number
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** IN-SILICO_ANNOTATION
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** Source: [[annotation-experimental_annotation]]
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***EC-NUMBER
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*** Assignment: ec-number
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* [[Tiso_gene_1537]]
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* Reaction: [[RXN-9674]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_1538]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-3121]]
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* [[PWY-6002]]
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* [[PWY-6788]]
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* [[PWY-5176]]
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* [[PWY-7092]]
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* [[PWY-7091]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=8938}}
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{{#set: common name=ORF}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=para-nitrobenzyl_esterase}}
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{{#set: left end position=6109}}
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{{#set: common name=alpha_beta_hydrolase_fold_protein}}
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{{#set: centisome position=61.096107    }}
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{{#set: common name=alpha_beta_hydrolase}}
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{{#set: reaction associated=3.2.1.21-RXN|RXN-10769|RXN-10773|RXN-13602|RXN-13603|RXN-14179|RXN-5341|RXN-8036|RXN-9674}}
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{{#set: common name=sialate_o-acetylesterase-like_protein}}
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{{#set: pathway associated=PWY-3121|PWY-6002|PWY-6788|PWY-5176|PWY-7092|PWY-7091}}
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{{#set: common name=serine_esterase}}
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{{#set: common name=lysophospholipase}}
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{{#set: common name=protein_chloroplastic}}
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{{#set: ec number=EC-3.1.1.1}}
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{{#set: gene associated=Tiso_gene_1922|Tiso_gene_12686|Tiso_gene_10066|Tiso_gene_4606|Tiso_gene_9429|Tiso_gene_11351|Tiso_gene_19778|Tiso_gene_4650|Tiso_gene_17029|Tiso_gene_16518|Tiso_gene_2556|Tiso_gene_1537|Tiso_gene_1538}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 21:18, 21 March 2018

Gene Tiso_gene_8669

  • right end position:
    • 8938
  • transcription direction:
    • POSITIVE
  • left end position:
    • 6109
  • centisome position:
    • 61.096107
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8669&oldid=47668"